RNA–Protein interactions for RNA: ENST00000390602.3

IGHV3-13-201, Transcript of immunoglobulin heavy variable 3-13, humanhuman

APPRIS P1 BASIC

Gene IGHV3-13, Length 430 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-13-201ENST00000390602 RBM7Q9Y580 266 aaKnown RBP11.31□□□□□ -0.6
IGHV3-13-201ENST00000390602 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
IGHV3-13-201ENST00000390602 TRAV18A0A075B6X5 111 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 RPS16P62249 146 aaKnown RBP11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 CX3CL1P78423 397 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 DEFB136Q30KP8 78 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 FOXB2Q5VYV0 432 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 CLCC1Q96S66 551 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 RNF5Q99942 180 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 METTL1Q9UBP6 276 aaKnown RBP11.3□□□□□ -0.6
IGHV3-13-201ENST00000390602 EGR2P11161 476 aaPredicted RBP11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 RPS19P39019 145 aaKnown RBP11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 MYCNOSP40205 109 aa11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 FLYWCH2Q96CP2 140 aaKnown RBP11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 P2RX4Q99571 388 aa11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 TSNAXQ99598 290 aaKnown RBP11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 TPSG1Q9NRR2 321 aa11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 SPATA2Q9UM82 520 aa11.29□□□□□ -0.6
IGHV3-13-201ENST00000390602 A0A0A6YYH2 397 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 A6NJ64 397 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 J3QRK9 145 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 CCL24O00175 119 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 SLC25A17O43808 307 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 SPDEFO95238 335 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 IGLV1-40P01703 118 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 NFYAP23511 347 aaPredicted RBP11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 CNIH2Q6PI25 160 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 TMEM65Q6PI78 240 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 MINDY2Q8NBR6 621 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 NECAP2Q9NVZ3 263 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 ANXA10Q9UJ72 324 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 A3GALT2U3KPV4 340 aa11.28□□□□□ -0.6
IGHV3-13-201ENST00000390602 DNAH3Q8TD57 4116 aa11.27□□□□□ -0.6
IGHV3-13-201ENST00000390602 TMEM127O75204 238 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 CA2P00918 260 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 CTXN2P0C2S0 81 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 PTHLHP12272 177 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 KIAA0141Q14154 515 aaPredicted RBP11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 GVQW1Q8N7I0 195 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 BVESQ8NE79 360 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 DDB2Q92466 427 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 FUNDC2Q9BWH2 189 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 AUNIPQ9H7T9 357 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 AURKAIP1Q9NWT8 199 aaPredicted RBP11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 OR2W1Q9Y3N9 320 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 NUBP2Q9Y5Y2 271 aa11.27□□□□□ -0.61
IGHV3-13-201ENST00000390602 IGKV1D-13A0A0B4J2D9 117 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 A0A1W2PN81 502 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 LINC00473A8K010 186 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 SOX15O60248 233 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 DUS4LO95620 317 aaKnown RBP11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 HLA-DQB1P01920 261 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 SMIM18P0DKX4 95 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 IGKV1-13P0DP09 117 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 CHRNA7P36544 502 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 RAB9AP51151 201 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 LUMP51884 338 aaPredicted RBP11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 RAB25P57735 213 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 TAGLNQ01995 201 aaKnown RBP11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 PJVKQ0ZLH3 352 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 CBX3Q13185 183 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 ZNF645Q8N7E2 425 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 BEST4Q8NFU0 473 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 CASTOR1Q8WTX7 329 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 ADTRPQ96IZ2 230 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 GNB4Q9HAV0 340 aa11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 FOXA2Q9Y261 457 aaPredicted RBP11.26□□□□□ -0.61
IGHV3-13-201ENST00000390602 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 ARPC1BO15143 372 aaKnown RBP11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 SHOXO15266 292 aa11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 FCER2P06734 321 aa11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 CRYGBP07316 175 aa11.25□□□□□ -0.61
IGHV3-13-201ENST00000390602 RRASP10301 218 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms