RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 KRBOX1C9JBD0 128 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 TXNL1O43396 289 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 MED6O75586 246 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 ZP3P21754 424 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 NFYBP25208 207 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 RPL31P62899 125 aaKnown RBP20.79■□□□□ 0.92
SHOX2-201ENST00000389589 H2BFWTQ7Z2G1 175 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 ODF3L1Q8IXM7 274 aa20.79■□□□□ 0.92
SHOX2-201ENST00000389589 RPUSD1Q9UJJ7 312 aaKnown RBP20.79■□□□□ 0.92
SHOX2-201ENST00000389589 B8ZZF3 427 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 SLC31A2O15432 143 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 HPRT1P00492 218 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 SPP1P10451 314 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 BLOC1S1P78537 153 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 ZNF295-AS1Q8N0V1 137 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 ZNF439Q8NDP4 499 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 OR5C1Q8NGR4 320 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 HSPB7Q9UBY9 170 aa20.78■□□□□ 0.92
SHOX2-201ENST00000389589 RAB19A4D1S5 217 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 IGHV3-7P01780 117 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 SULT1A1P50225 295 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 PPOXP50336 477 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 MIDNQ504T8 468 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 RPL39P5Q59GN2 51 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 CCDC28AQ8IWP9 274 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 CST7O76096 145 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 DYNLT3P51808 116 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 TNFRSF9Q07011 255 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 CLINT1Q14677 625 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 LEAP2Q969E1 77 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 C19orf12Q9NSK7 152 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 PSENENQ9NZ42 101 aa20.77■□□□□ 0.92
SHOX2-201ENST00000389589 SHOXO15266 292 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 FCGR3BO75015 233 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 UBE2KP61086 200 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 UQCC3Q6UW78 93 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 S1PR3Q99500 378 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 MARCH11A6NNE9 402 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 ARHGDIBP52566 201 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 LINC00205P59089 165 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 PRAMEF5Q5TYX0 476 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 R3HDM4Q96D70 268 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 ADTRPQ96IZ2 230 aa20.76■□□□□ 0.91
SHOX2-201ENST00000389589 FAM90A9PA6NNJ1 464 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 FSTL3O95633 263 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 IAPPP10997 89 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 ZNF273Q14593 569 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 LYPD2Q6UXB3 125 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 ZNF714Q96N38 554 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 PARP11Q9NR21 331 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 MMP26Q9NRE1 261 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 NBEAQ8NFP9 2946 aa20.75■□□□□ 0.91
SHOX2-201ENST00000389589 DFFBO76075 338 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 DAOP14920 347 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 RAB5CP51148 216 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 MRPS11P82912 194 aaKnown RBP20.74■□□□□ 0.91
SHOX2-201ENST00000389589 UTF1Q5T230 341 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 HSD17B11Q8NBQ5 300 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 SAA2-SAA4A0A096LPE2 208 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 SAA2P0DJI9 122 aaPredicted RBP20.74■□□□□ 0.91
SHOX2-201ENST00000389589 THBS3P49746 956 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 C4orf17Q53FE4 359 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 PXDC1Q5TGL8 231 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 TMEM200BQ69YZ2 307 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 HEPN1Q6WQI6 88 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 IL34Q6ZMJ4 242 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 SLC25A48Q6ZT89 311 aaKnown RBP20.74■□□□□ 0.91
SHOX2-201ENST00000389589 TMEM217Q8N7C4 229 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 DDB2Q92466 427 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 ATP5SQ99766 215 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 RBKSQ9H477 322 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 PLA2G2EQ9NZK7 142 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 ITPR1Q14643 2758 aa20.74■□□□□ 0.91
SHOX2-201ENST00000389589 A0A1W2PPE3 182 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 MED19A0JLT2 244 aaPredicted RBP20.73■□□□□ 0.91
SHOX2-201ENST00000389589 H3BP45 60 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 DVL1O14640 695 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 FCN3O75636 299 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 MMP23AO75900 390 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 LYG1Q8N1E2 194 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 LINC00052Q96N35 136 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 DANCRP0C864 163 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 OR4S2Q8NH73 311 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 H1FXQ92522 213 aaKnown RBP20.73■□□□□ 0.91
SHOX2-201ENST00000389589 RAB39BQ96DA2 213 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 CTSZQ9UBR2 303 aa20.73■□□□□ 0.91
SHOX2-201ENST00000389589 ZNF251Q9BRH9 671 aa20.72■□□□□ 0.91
SHOX2-201ENST00000389589 ZG16O60844 167 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 GNG10P50151 68 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 ERVK-16P61578 105 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 TMEM267Q0VDI3 215 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-201ENST00000389589 STPG2Q8N412 459 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 GNPNAT1Q96EK6 184 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-201ENST00000389589 STRAPQ9Y3F4 350 aaKnown RBP20.71■□□□□ 0.91
SHOX2-201ENST00000389589 HIVEP3Q5T1R4 2406 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 KALRNO60229 2985 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 NQO2P16083 231 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 AGAP20933 346 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 HBG1P69891 147 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 HBG2P69892 147 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms