RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 C11orf88Q6PI97 169 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 TREML4Q6UXN2 200 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 C5orf56Q8N8D9 126 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 OR2T6Q8NHC8 308 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
SNRPB-201ENST00000381342 PRSS22Q9GZN4 317 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 FXYD6Q9H0Q3 95 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 RABL2AQ9UBK7 228 aaPredicted RBP12.86□□□□□ -0.35
SNRPB-201ENST00000381342 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 GAB2Q9UQC2 676 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 WASHC3Q9Y3C0 194 aa12.86□□□□□ -0.35
SNRPB-201ENST00000381342 NCBP2LA6PVI3 153 aaKnown RBP12.85□□□□□ -0.35
SNRPB-201ENST00000381342 M0QZK8 103 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 APOA2P02652 100 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 CD3DP04234 171 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 F2RL1P55085 397 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 PROK1P58294 105 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 MMDQ15546 238 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 ACTBL2Q562R1 376 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 ARSJQ5FYB0 599 aaPredicted RBP12.85□□□□□ -0.35
SNRPB-201ENST00000381342 CCDC190Q86UF4 302 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 RITA1Q96K30 269 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 CITED1Q99966 193 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 PLSCR3Q9NRY6 295 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 SLC35D1Q9NTN3 355 aa12.85□□□□□ -0.35
SNRPB-201ENST00000381342 RBMX2Q9Y388 322 aaKnown RBP12.85□□□□□ -0.35
SNRPB-201ENST00000381342 LINC00473A8K010 186 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 FGF16O43320 207 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 GSTZ1O43708 216 aaPredicted RBP12.84□□□□□ -0.35
SNRPB-201ENST00000381342 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 MC5RP33032 325 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 DUTP33316 252 aaKnown RBP12.84□□□□□ -0.35
SNRPB-201ENST00000381342 THBS3P49746 956 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 ZNF79Q15937 498 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 RNASE10Q5GAN6 216 aaKnown RBP12.84□□□□□ -0.35
SNRPB-201ENST00000381342 C9orf152Q5JTZ5 239 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 Q8N2B8 174 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 Q8N9W7 124 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 OR6Q1Q8NGQ2 317 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 MOB3AQ96BX8 217 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 GPHA2Q96T91 129 aa12.84□□□□□ -0.35
SNRPB-201ENST00000381342 TINAGL1Q9GZM7 467 aaPredicted RBP12.84□□□□□ -0.35
SNRPB-201ENST00000381342 TNFSF12O43508 249 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 PEX14O75381 377 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 SLC22A5O76082 557 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 TAS2R19P59542 299 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 TSPAN5P62079 268 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 RPL30P62888 115 aaKnown RBP12.83□□□□□ -0.36
SNRPB-201ENST00000381342 SSBP1Q04837 148 aaKnown RBP12.83□□□□□ -0.36
SNRPB-201ENST00000381342 SRSF4Q08170 494 aaKnown RBP12.83□□□□□ -0.36
SNRPB-201ENST00000381342 PYDC2Q56P42 97 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 OR2B11Q5JQS5 317 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 VAX1Q5SQQ9 334 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 DHRS11Q6UWP2 260 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 PDPNQ86YL7 162 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 TMEM229BQ8NBD8 167 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 BVESQ8NE79 360 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 OR4D10Q8NGI6 311 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 OR6F1Q8NGZ6 308 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 DDB2Q92466 427 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 TSC22D3Q99576 134 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 TAS2R8Q9NYW2 309 aa12.83□□□□□ -0.36
SNRPB-201ENST00000381342 NBR2O15453 112 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 CSF1P09603 554 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 TBPP20226 339 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 VDAC2P45880 294 aaPredicted RBP12.82□□□□□ -0.36
SNRPB-201ENST00000381342 EIF4EBP1Q13541 118 aaPredicted RBP12.82□□□□□ -0.36
SNRPB-201ENST00000381342 SPANXN2Q5MJ10 180 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 FAAP20Q6NZ36 180 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 STEAP1BQ6NZ63 245 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 OR8H1Q8NGG4 311 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 TCTEX1D2Q8WW35 142 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 ADTRPQ96IZ2 230 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 SERTAD4Q9NUC0 356 aa12.82□□□□□ -0.36
SNRPB-201ENST00000381342 RAB3DO95716 219 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 CD74P04233 296 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 IFNA6P05013 189 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 MSMO1Q15800 293 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 RTL8BQ17RB0 113 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 KLHDC1Q8N7A1 406 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 RASL11BQ9BPW5 248 aa12.81□□□□□ -0.36
SNRPB-201ENST00000381342 LIN7CQ9NUP9 197 aaKnown RBP12.81□□□□□ -0.36
SNRPB-201ENST00000381342 ZNF107Q9UII5 783 aaPredicted RBP12.81□□□□□ -0.36
SNRPB-201ENST00000381342 ANKRD20A5PA0PJZ0 165 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 NDUFA3O95167 84 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 CRYZL1O95825 349 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 VSIG10L2P0DP72 767 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 GNRHRP30968 328 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 ETV6P41212 452 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 KRTAP10-3P60369 221 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 RPS16P62249 146 aaKnown RBP12.8□□□□□ -0.36
SNRPB-201ENST00000381342 CBX3Q13185 183 aa12.8□□□□□ -0.36
SNRPB-201ENST00000381342 Q8N402 240 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms