RNA–Protein interactions for RNA: ENST00000381227.5

POLR2B-202, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene POLR2B, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-202ENST00000381227 HIST1H2BAQ96A08 127 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 HSD17B10Q99714 261 aaKnown RBP5.55□□□□□ -1.52
POLR2B-202ENST00000381227 ACTR3CQ9C0K3 210 aaPredicted RBP5.55□□□□□ -1.52
POLR2B-202ENST00000381227 USF3Q68DE3 2245 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 GTF3C1Q12789 2109 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 A0A0U1RQK1 487 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 ODAMA1E959 279 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 SOX15O60248 233 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 IGKV1-5P01602 117 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 OPN1MWP04001 364 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 OPN1MW2P0DN77 364 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 OPN1MW3P0DN78 364 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 WT1P19544 449 aaPredicted RBP5.55□□□□□ -1.52
POLR2B-202ENST00000381227 LINC00205P59089 165 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 VKORC1L1Q8N0U8 176 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 ZDHHC16Q969W1 377 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 TMEM147Q9BVK8 224 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 DYNLRB1Q9NP97 96 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 METRNQ9UJH8 293 aa5.55□□□□□ -1.52
POLR2B-202ENST00000381227 CHD8Q9HCK8 2581 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 COL27A1Q8IZC6 1860 aaPredicted RBP5.54□□□□□ -1.52
POLR2B-202ENST00000381227 IGHV1-18A0A0C4DH31 117 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 MARCH11A6NNE9 402 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 ATXN7O15265 892 aaPredicted RBP5.54□□□□□ -1.52
POLR2B-202ENST00000381227 CLDN14O95500 239 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 ADH4P08319 380 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 SLC25A6P12236 298 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 LRP11Q86VZ4 500 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 TAF15Q92804 592 aaKnown RBP eCLIP5.54□□□□□ -1.52
POLR2B-202ENST00000381227 ARV1Q9H2C2 271 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 ADGRG4Q8IZF6 3080 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 PLCE1Q9P212 2302 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 TRBV6-6A0A0A6YYG2 114 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 IGHG3P01860 377 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 EIF2S3P41091 472 aaKnown RBP5.54□□□□□ -1.52
POLR2B-202ENST00000381227 CCL8P80075 99 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 RAB31Q13636 194 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 KHDC3LQ587J8 217 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 TMEM41BQ5BJD5 291 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 TRAT1Q6PIZ9 186 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 C1orf162Q8NEQ5 155 aaPredicted RBP5.54□□□□□ -1.52
POLR2B-202ENST00000381227 LRRC30A6NM36 301 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 MGST3O14880 152 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 TMPRSS2O15393 492 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 MBP02144 154 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 CD55P08174 381 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 BCL2P10415 239 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 SERF2P84101 59 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 FAM27E3Q08E93 113 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 C1orf87Q8N0U7 546 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 CISD2Q8N5K1 135 aaKnown RBP5.54□□□□□ -1.52
POLR2B-202ENST00000381227 NANPQ8TBE9 248 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 SMDT1Q9H4I9 107 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 NIT2Q9NQR4 276 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 OR6C3Q9NZP0 311 aa5.54□□□□□ -1.52
POLR2B-202ENST00000381227 RPL30P62888 115 aaKnown RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ACOT6Q3I5F7 207 aaPredicted RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 C1orf185Q5T7R7 199 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 NCR3LG1Q68D85 454 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 GFRALQ6UXV0 394 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ZNF525Q8N782 197 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 WDR31Q8NA23 367 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 RCC1LQ96I51 464 aaKnown RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 LRFN3Q9BTN0 628 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 VSIRQ9H7M9 311 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 GAB2Q9UQC2 676 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ANKRD11Q6UB99 2663 aaPredicted RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 NKX6-3A6NJ46 265 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ZNF98A6NK75 572 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 IGKV3-15P01624 115 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 HSPB1P04792 205 aaKnown RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 FOXC1Q12948 553 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ZNF585BQ52M93 769 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 RPL39P5Q59GN2 51 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 NCMAPQ5T1S8 102 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 TMEM108Q6UXF1 575 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 SLC16A13Q7RTY0 426 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 COQ2Q96H96 371 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 CCL13Q99616 98 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 WDR61Q9GZS3 305 aaKnown RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 VAX2Q9UIW0 290 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 PCSK5Q92824 1860 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 FAM90A26D6RGX4 464 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 H7BYZ3 331 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 CYB5R3P00387 301 aaPredicted RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 IGKV1-39P01597 117 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 IGKV1D-39P04432 117 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 SRP19P09132 144 aaKnown RBP5.53□□□□□ -1.52
POLR2B-202ENST00000381227 PAX9P55771 341 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ERVK11-1P61568 191 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ATP6V1FQ16864 119 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ZNF343Q6P1L6 599 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 DPPA3Q6W0C5 159 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 CCL17Q92583 94 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 ASCL3Q9NQ33 180 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 PLSCR4Q9NRQ2 329 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 RNF7Q9UBF6 113 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 KIAA1549Q9HCM3 1950 aa5.53□□□□□ -1.52
POLR2B-202ENST00000381227 COLCA2A8K830 154 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms