RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SERF2P84101 59 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 TGFBR3Q03167 851 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 BTNL3Q6UXE8 466 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 LINC00596Q86U02 117 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OR10A7Q8NGE5 316 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OR1L1Q8NH94 360 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 MPC1Q9Y5U8 109 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 A0A1B0GV90 55 aa13.65□□□□□ -0.23
NKX3-1-201ENST00000380871 J3QT63 122 aa13.65□□□□□ -0.23
NKX3-1-201ENST00000380871 MSL2Q9HCI7 577 aa13.65□□□□□ -0.23
NKX3-1-201ENST00000380871 AURKAIP1Q9NWT8 199 aaPredicted RBP13.65□□□□□ -0.23
NKX3-1-201ENST00000380871 WNT9BO14905 357 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 HOXC12P31275 282 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 TNFRSF9Q07011 255 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 PIEZO2Q9H5I5 2752 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 INTS1Q8N201 2190 aaKnown RBP13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 ACACAQ13085 2346 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 PSPNO60542 156 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 RNF224P0DH78 156 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 MPV17P39210 176 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 RPL23P62829 140 aaKnown RBP13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 PLPPR2Q96GM1 343 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 P2RX4Q99571 388 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 PCGF1Q9BSM1 259 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 OR2D2Q9H210 308 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 PARLQ9H300 379 aa13.64□□□□□ -0.23
NKX3-1-201ENST00000380871 IFNL4K9M1U5 179 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 PFN1P07737 140 aaKnown RBP13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 NAT8Q9UHE5 227 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 SMCO3A2RU48 225 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 NPIPB11E5RHQ5 1161 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 AMBPP02760 352 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 EGR1P18146 543 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 MRPL49Q13405 166 aaKnown RBP13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 TMEM241Q24JQ0 296 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 BSXQ3C1V8 233 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 TMEM14EPQ6UXP3 125 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 OR52L2PQ8NGH6 319 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 OR4F4Q96R69 305 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 A0A1W2PPQ1 181 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 ZG16O60844 167 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 S1PR2O95136 353 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 DDTP30046 118 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 LTC4SQ16873 150 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 ZDHHC11Q9H8X9 412 aa13.63□□□□□ -0.23
NKX3-1-201ENST00000380871 KMT2EQ8IZD2 1858 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 OR3A1P47881 315 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 PSG7Q13046 419 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 PRAMEF6Q5VXH4 476 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 GMPPAQ96IJ6 420 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 RTL8AQ9BWD3 113 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 PKIBQ9C010 78 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 OPN3Q9H1Y3 402 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 ODAMA1E959 279 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 SMPD2O60906 423 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 KBTBD11O94819 623 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 GALR1P47211 349 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 VHLLQ6RSH7 139 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 WFIKKN1Q96NZ8 548 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 PITPNC1Q9UKF7 332 aa13.62□□□□□ -0.23
NKX3-1-201ENST00000380871 LAMA5O15230 3695 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 A0A087X0M5 115 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 A0A1B0GX30 115 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 C1QTNF9BB2RNN3 333 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 IFNA1P01562 189 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 FGF7P21781 194 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 OR51G1Q8NGK1 321 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 PINX1Q96BK5 328 aaKnown RBP13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 C17orf98A8MV24 154 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 FFAR4Q5NUL3 377 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 TMEM183AQ8IXX5 376 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 OR10G9Q8NGN4 311 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 OR10G7Q8NGN6 311 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 DUSP13Q9UII6 198 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 XKRY2A2RUG3 117 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 H7BYZ3 331 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 PAGE4O60829 102 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 GZMBP10144 247 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 COL8A2P25067 703 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 AESQ08117 197 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 GCSAMLQ5JQS6 135 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 SRD5A3Q9H8P0 318 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 GP6Q9HCN6 339 aa13.61□□□□□ -0.23
NKX3-1-201ENST00000380871 ERVK11-1P61568 191 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 ZNF66Q6ZN08 573 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 TMEM37Q8WXS4 190 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 CTDSP1Q9GZU7 261 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 ASCL3Q9NQ33 180 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 MBNL3Q9NUK0 354 aaKnown RBP13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 IGHV3-43A0A0B4J1X8 118 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 LRP5LA4QPB2 252 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 C12orf77C9JDV5 145 aa13.6□□□□□ -0.23
NKX3-1-201ENST00000380871 CRYAAP02489 173 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms