RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TPSG1Q9NRR2 321 aa13.3□□□□□ -0.28
HMGN1-204ENST00000380749 ERICH4A6NGS2 130 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 DENRO43583 198 aaKnown RBP13.29□□□□□ -0.28
HMGN1-204ENST00000380749 SLC25A17O43808 307 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 CD3GP09693 182 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 PSMD7P51665 324 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 TMEM50BP56557 158 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 CLDN12P56749 244 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 CBX3Q13185 183 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 POC5Q8NA72 575 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 ZNF355PQ9NSJ1 428 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 SLC35D1Q9NTN3 355 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 V9GY05 133 aa13.29□□□□□ -0.28
HMGN1-204ENST00000380749 RYR2Q92736 4967 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 IGKV1-6A0A0C4DH72 117 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 H3BUA1 57 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 FABP7O15540 132 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 PROP1O75360 226 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 CNIH1O95406 144 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 FXYD3Q14802 87 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 PLAC9Q5JTB6 97 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 RAB3CQ96E17 227 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 RCHY1Q96PM5 261 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 LYSTQ99698 3801 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 ELOVL1Q9BW60 279 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 OR2D2Q9H210 308 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 ACOT13Q9NPJ3 140 aa13.28□□□□□ -0.28
HMGN1-204ENST00000380749 STARD9Q9P2P6 4700 aa13.27□□□□□ -0.28
HMGN1-204ENST00000380749 C13orf42A0A1B0GVH6 325 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 BET1O15155 118 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 ZP3P21754 424 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 GADD45AP24522 165 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 FABP5Q01469 135 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 C2orf76Q3KRA6 126 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 PRSS48Q7RTY5 328 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 RHOVQ96L33 236 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 HARBI1Q96MB7 349 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 MGLLQ99685 303 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 STUB1Q9UNE7 303 aa13.27□□□□□ -0.29
HMGN1-204ENST00000380749 CSMD3Q7Z407 3707 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 A0A0G2JLM5 398 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 TMEM272A0A1B0GTI8 110 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 FCGR3AP08637 254 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 LGALS7P47929 136 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 LINC00205P59089 165 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 HES5Q5TA89 166 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 OVCH2Q7RTZ1 564 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 SBSPONQ8IVN8 264 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 OR10J5Q8NHC4 309 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 RSRP1Q9BUV0 290 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 ZMAT4Q9H898 229 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 RANGRFQ9HD47 186 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-204ENST00000380749 NKX1-2Q9UD57 310 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-204ENST00000380749 RAB22AQ9UL26 194 aa13.26□□□□□ -0.29
HMGN1-204ENST00000380749 TRIM64CA6NLI5 447 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 PDCD5O14737 125 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 LDLRAD4O15165 306 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 DIRAS3O95661 229 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 CRHBPP24387 322 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 TAGLNQ01995 201 aaKnown RBP13.25□□□□□ -0.29
HMGN1-204ENST00000380749 SRSF7Q16629 238 aaKnown RBP eCLIP13.25□□□□□ -0.29
HMGN1-204ENST00000380749 RTL8BQ17RB0 113 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 MOGAT2Q3SYC2 334 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 TMEM68Q96MH6 324 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 SDHAF2Q9NX18 166 aa13.25□□□□□ -0.29
HMGN1-204ENST00000380749 DNAH1Q9P2D7 4330 aa13.24□□□□□ -0.29
HMGN1-204ENST00000380749 SNRPBP14678 240 aaKnown RBP13.24□□□□□ -0.29
HMGN1-204ENST00000380749 TBCEQ15813 527 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-204ENST00000380749 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
HMGN1-204ENST00000380749 MUC7Q8TAX7 377 aa13.24□□□□□ -0.29
HMGN1-204ENST00000380749 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
HMGN1-204ENST00000380749 GINS4Q9BRT9 223 aa13.24□□□□□ -0.29
HMGN1-204ENST00000380749 BLOC1S6Q9UL45 172 aa13.24□□□□□ -0.29
HMGN1-204ENST00000380749 RBM7Q9Y580 266 aaKnown RBP13.24□□□□□ -0.29
HMGN1-204ENST00000380749 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 TRBV6-7A0A0A0MS04 114 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 SHOXO15266 292 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 IGLV2-23P01705 113 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 AADACP22760 399 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 MYL9P24844 172 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 MAP2K4P45985 399 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 IGSF11Q5DX21 431 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 OR5T1Q8NG75 326 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 OR10R2Q8NGX6 335 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 CENPOQ9BU64 300 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 KCNK7Q9Y2U2 307 aa13.23□□□□□ -0.29
HMGN1-204ENST00000380749 A0A075B6Q4 140 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 TRAV1-2A0A0B4J238 106 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 MFNGO00587 321 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 GSTT2P0CG29 244 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 GSTT2BP0CG30 244 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 RRASP10301 218 aa13.22□□□□□ -0.29
HMGN1-204ENST00000380749 HIST1H1DP16402 221 aaKnown RBP13.22□□□□□ -0.29
HMGN1-204ENST00000380749 RAB6AP20340 208 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms