RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 C10orf128Q5T292 105 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 KLF14Q8TD94 323 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-202ENST00000380518 THSD7AQ9UPZ6 1657 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 COMPP49747 757 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-202ENST00000380518 EGR4Q05215 589 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF658BQ4V348 819 aaPredicted RBP13.78□□□□□ -0.2
COL2A1-202ENST00000380518 FAM181AQ8N9Y4 354 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 JPT1Q9UK76 154 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 MARCH11A6NNE9 402 aa13.77□□□□□ -0.2
COL2A1-202ENST00000380518 HLA-DQA1P01909 254 aa13.77□□□□□ -0.2
COL2A1-202ENST00000380518 KLK2P20151 261 aa13.77□□□□□ -0.2
COL2A1-202ENST00000380518 RND2P52198 227 aa13.77□□□□□ -0.2
COL2A1-202ENST00000380518 ATG101Q9BSB4 218 aa13.77□□□□□ -0.2
COL2A1-202ENST00000380518 SPTBP11277 2137 aa13.77□□□□□ -0.2
COL2A1-202ENST00000380518 CEBPDP49716 269 aaPredicted RBP13.77□□□□□ -0.21
COL2A1-202ENST00000380518 FAM209AQ5JX71 171 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 OR52M1Q8NGK5 317 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 LSM10Q969L4 123 aaKnown RBP13.77□□□□□ -0.21
COL2A1-202ENST00000380518 SRXN1Q9BYN0 137 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 ARFGEF1Q9Y6D6 1849 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 PGPA6NDG6 321 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 RNF224P0DH78 156 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 TLNRD1Q9H1K6 362 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 CISD1Q9NZ45 108 aaKnown RBP13.77□□□□□ -0.21
COL2A1-202ENST00000380518 HSPB7Q9UBY9 170 aa13.77□□□□□ -0.21
COL2A1-202ENST00000380518 A0A1W2PR77 199 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 J3QW42 95 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 HSPB9Q9BQS6 159 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 KIF13BQ9NQT8 1826 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM229AB2RXF0 380 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 ZNF25P17030 456 aaPredicted RBP13.76□□□□□ -0.21
COL2A1-202ENST00000380518 APCDD1LQ8NCL9 501 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 ALPK2Q86TB3 2170 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 H0YL77 283 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 OR2A4O95047 310 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 PLAUP00749 431 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM30BQ3MIR4 351 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 STPG3Q8N7X2 389 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 OR2A7Q96R45 310 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 GPHA2Q96T91 129 aa13.76□□□□□ -0.21
COL2A1-202ENST00000380518 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
COL2A1-202ENST00000380518 KLF4O43474 513 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 MAS1LP35410 378 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 CLEC2AQ6UVW9 174 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM45BQ96B21 275 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 MEGF10Q96KG7 1140 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 ZNF207O43670 478 aaKnown RBP13.75□□□□□ -0.21
COL2A1-202ENST00000380518 SLC25A17O43808 307 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 SSTR5P35346 364 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 RND3P61587 244 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 TWIST1Q15672 202 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 ZNF841Q6ZN19 808 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 C8orf88P0DMB2 117 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 DNAJC4Q9NNZ3 241 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 CXorf65A6NEN9 183 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM187Q14656 261 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 TGIF1Q15583 401 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 SLC25A53Q5H9E4 307 aa13.75□□□□□ -0.21
COL2A1-202ENST00000380518 A0A1W2PS18 150 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 M0R3E3 92 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 ZG16O60844 167 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 NPBWR2P48146 333 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 RELBQ01201 579 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 RGPD4Q7Z3J3 1758 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 LOC389332A0A1B0GUA5 103 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 IFITM2Q01629 132 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 NHLRC3Q5JS37 347 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 OR10J6PQ8NGY7 276 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM54Q969K7 222 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 METTL26Q96S19 204 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 SFXN3Q9BWM7 321 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 COL25A1Q9BXS0 654 aaPredicted RBP13.74□□□□□ -0.21
COL2A1-202ENST00000380518 TCF19Q9Y242 345 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 DANCRP0C864 163 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 POC1AQ8NBT0 407 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 ZNF818PQ6ZRF7 136 aa13.74□□□□□ -0.21
COL2A1-202ENST00000380518 S1PR2O95136 353 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 NAT2P11245 290 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 COL5A1-AS1Q5SY13 56 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 EPOPA6NHQ4 379 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 SMAGPQ0VAQ4 97 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 EBLN2Q6P2I7 272 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 QTRT1Q9BXR0 403 aaKnown RBP13.73□□□□□ -0.21
COL2A1-202ENST00000380518 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 ZNF729A6NN14 1252 aaPredicted RBP13.73□□□□□ -0.21
COL2A1-202ENST00000380518 SIGLEC5O15389 551 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 CRXO43186 299 aaPredicted RBP13.73□□□□□ -0.21
COL2A1-202ENST00000380518 KBTBD11O94819 623 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 GCGP01275 180 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 OR9G1Q8NH87 305 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 TRBV23-1A0A0A0MS06 115 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 PF4V1P10720 104 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms