RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 LAMP3Q9UQV4 416 aa20.69■□□□□ 0.9
NDEL1-202ENST00000380025 IRF2P14316 349 aa20.69■□□□□ 0.9
NDEL1-202ENST00000380025 SPANXN5Q5MJ07 72 aa20.69■□□□□ 0.9
NDEL1-202ENST00000380025 C17orf50Q8WW18 174 aa20.69■□□□□ 0.9
NDEL1-202ENST00000380025 DIRC2Q96SL1 478 aa20.69■□□□□ 0.9
NDEL1-202ENST00000380025 GUK1Q16774 197 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 TCF23Q7RTU1 214 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 ZCCHC24Q8N2G6 241 aaKnown RBP20.68■□□□□ 0.9
NDEL1-202ENST00000380025 ZNF525Q8N782 197 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 FAM216BQ8N7L0 139 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 FAM234AQ9H0X4 552 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 IFNA5P01569 189 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 TNFRSF1AP19438 455 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 TAGLNQ01995 201 aaKnown RBP20.68■□□□□ 0.9
NDEL1-202ENST00000380025 RPL39P5Q59GN2 51 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 H2BFWTQ7Z2G1 175 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 CD300LFQ8TDQ1 290 aa20.68■□□□□ 0.9
NDEL1-202ENST00000380025 KBTBD11-OT1A0A1B0GTJ5 212 aa20.67■□□□□ 0.9
NDEL1-202ENST00000380025 MARCH11A6NNE9 402 aa20.67■□□□□ 0.9
NDEL1-202ENST00000380025 SLC31A2O15432 143 aa20.67■□□□□ 0.9
NDEL1-202ENST00000380025 UCNP55089 124 aa20.67■□□□□ 0.9
NDEL1-202ENST00000380025 CLN8Q9UBY8 286 aa20.67■□□□□ 0.9
NDEL1-202ENST00000380025 TMEM14EPQ6UXP3 125 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 THNSL2Q86YJ6 484 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 GFOD1Q9NXC2 390 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 TRGV10A0A0A0MS01 117 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 A0A1B0GV50 99 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 M0R1X1 148 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 HBG1P69891 147 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 HBG2P69892 147 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 LEAP2Q969E1 77 aa20.66■□□□□ 0.9
NDEL1-202ENST00000380025 ITGB1BP1O14713 200 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 FCGR3BO75015 233 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 SNAPINO95295 136 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 NPBWR1P48145 328 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 SLC25A24Q6NUK1 477 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 LFNGQ8NES3 379 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 R3HDM4Q96D70 268 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 RAB9BQ9NP90 201 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 FBXO7Q9Y3I1 522 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 SMG1Q96Q15 3661 aaKnown RBP20.65■□□□□ 0.9
NDEL1-202ENST00000380025 TRGV8A0A0C4DH27 118 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 LOC105371267A0A1B0GV96 52 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 PEA15Q15121 130 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 SPSB3Q6PJ21 355 aa20.65■□□□□ 0.9
NDEL1-202ENST00000380025 GPR37O15354 613 aa20.64■□□□□ 0.89
NDEL1-202ENST00000380025 PPT1P50897 306 aa20.64■□□□□ 0.89
NDEL1-202ENST00000380025 TLE1Q04724 770 aa20.64■□□□□ 0.89
NDEL1-202ENST00000380025 AKR1C8PQ5T2L2 129 aa20.64■□□□□ 0.89
NDEL1-202ENST00000380025 C1orf229Q6ZS94 237 aaPredicted RBP20.64■□□□□ 0.89
NDEL1-202ENST00000380025 LILRB2Q8N423 598 aa20.64■□□□□ 0.89
NDEL1-202ENST00000380025 OR4C12Q96R67 309 aa20.64■□□□□ 0.89
NDEL1-202ENST00000380025 EIF5A2Q9GZV4 153 aaKnown RBP20.64■□□□□ 0.89
NDEL1-202ENST00000380025 SHISA9B4DS77 424 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 PPIHO43447 177 aaKnown RBP20.63■□□□□ 0.89
NDEL1-202ENST00000380025 CT45A1Q5HYN5 189 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 CT45A3Q8NHU0 189 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 RSG1Q9BU20 258 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 IGF2RP11717 2491 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 ADGRG4Q8IZF6 3080 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 ZG16O60844 167 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 HPRT1P00492 218 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 RAB7AP51149 207 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 CCL20P78556 96 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 SP5Q6BEB4 398 aaPredicted RBP20.63■□□□□ 0.89
NDEL1-202ENST00000380025 DMRTC2Q8IXT2 367 aaPredicted RBP20.63■□□□□ 0.89
NDEL1-202ENST00000380025 SCGB1C1Q8TD33 95 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 ZDHHC16Q969W1 377 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 NGBQ9NPG2 151 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 GAB2Q9UQC2 676 aa20.63■□□□□ 0.89
NDEL1-202ENST00000380025 LRRC75BQ2VPJ9 315 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 DTD1Q8TEA8 209 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 LINC00574Q9H8X3 128 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 SAP30LQ9HAJ7 183 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 HCFC1P51610 2035 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 A0A1B0GW64 132 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 A0A1W2PPE3 182 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 RBFOX2O43251 390 aaKnown RBP eCLIP20.62■□□□□ 0.895e-9■■■■■ 99.6
NDEL1-202ENST00000380025 H2AFB1P0C5Y9 115 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 OR9G9P0C7N8 305 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 SLC38A11Q08AI6 406 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 NCMAPQ5T1S8 102 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 CORO2AQ92828 525 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 PBDC1Q9BVG4 233 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 ROS1P08922 2347 aa20.62■□□□□ 0.89
NDEL1-202ENST00000380025 ZNF729A6NN14 1252 aaPredicted RBP20.61■□□□□ 0.89
NDEL1-202ENST00000380025 TMPRSS2O15393 492 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 OR8G2PQ6IF36 304 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 TMEM88Q6PEY1 159 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 DPPA3Q6W0C5 159 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 DDB2Q92466 427 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 KPTNQ9Y664 436 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 RBMXL2O75526 392 aaKnown RBP20.61■□□□□ 0.89
NDEL1-202ENST00000380025 OR8U8P0C7N1 319 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 ZNF439Q8NDP4 499 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 NEUROG1Q92886 237 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 PARD6GQ9BYG4 376 aaPredicted RBP20.61■□□□□ 0.89
NDEL1-202ENST00000380025 EGLN1Q9GZT9 426 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 IDI2-AS1Q9NZ38 188 aa20.61■□□□□ 0.89
NDEL1-202ENST00000380025 DOCK11Q5JSL3 2073 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms