RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 NDPQ00604 133 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 TAGLNQ01995 201 aaKnown RBP13.3□□□□□ -0.28
RER1-202ENST00000378512 FOXB2Q5VYV0 432 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
RER1-202ENST00000378512 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 OR2W1Q9Y3N9 320 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 ATP6V0E1O15342 81 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 TUSC2O75896 110 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 IGLV2-14P01704 120 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 PF4V1P10720 104 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 CDX1P47902 265 aaPredicted RBP13.3□□□□□ -0.28
RER1-202ENST00000378512 PSG5Q15238 335 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 UBE2NLQ5JXB2 153 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 HOGA1Q86XE5 327 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 ANKRD13BQ86YJ7 626 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 MINDY2Q8NBR6 621 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 FBXL15Q9H469 300 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 NECAP2Q9NVZ3 263 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
RER1-202ENST00000378512 FCN1O00602 326 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 GABARAPO95166 117 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 IGLV2-23P01705 113 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 APOA2P02652 100 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 RPLP1P05386 114 aaKnown RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 VDAC1P21796 283 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 DUTP33316 252 aaKnown RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 THBS3P49746 956 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 CX3CL1P78423 397 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 KIAA0141Q14154 515 aaPredicted RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 CTF1Q16619 201 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 TMEM177Q53S58 311 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 C18orf65Q6ZTR6 163 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 LINC00482Q8N8I6 264 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 FLYWCH2Q96CP2 140 aaKnown RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 S100A16Q96FQ6 103 aaKnown RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 P2RX4Q99571 388 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 TSNAXQ99598 290 aaKnown RBP13.29□□□□□ -0.28
RER1-202ENST00000378512 SLC35D1Q9NTN3 355 aa13.29□□□□□ -0.28
RER1-202ENST00000378512 CRYGBP07316 175 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 CD33P20138 364 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 NFYAP23511 347 aaPredicted RBP13.28□□□□□ -0.28
RER1-202ENST00000378512 VBP1P61758 197 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 EIF4EBP1Q13541 118 aaPredicted RBP13.28□□□□□ -0.28
RER1-202ENST00000378512 CXorf66Q5JRM2 361 aaPredicted RBP13.28□□□□□ -0.28
RER1-202ENST00000378512 KHDC1LQ5JSQ8 128 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 REC114Q7Z4M0 266 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 ZNF695Q8IW36 515 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 GVQW1Q8N7I0 195 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 BEST4Q8NFU0 473 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 ADTRPQ96IZ2 230 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 ANAPC10Q9UM13 185 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 NUBP2Q9Y5Y2 271 aa13.28□□□□□ -0.28
RER1-202ENST00000378512 IGKV1D-13A0A0B4J2D9 117 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 LINC00473A8K010 186 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 G3V318 75 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 SLC22A5O76082 557 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 IGKV1-13P0DP09 117 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 PTHLHP12272 177 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 LGALS7P47929 136 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 ALDH3B2P48448 385 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 SSBP2P81877 361 aaPredicted RBP13.27□□□□□ -0.29
RER1-202ENST00000378512 C8orf86Q6ZUL3 223 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 SAMD12Q8N8I0 201 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 SNAPC3Q92966 411 aa13.27□□□□□ -0.29
RER1-202ENST00000378512 MRPS26Q9BYN8 205 aaKnown RBP13.27□□□□□ -0.29
RER1-202ENST00000378512 NAA50Q9GZZ1 169 aaKnown RBP13.27□□□□□ -0.29
RER1-202ENST00000378512 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
RER1-202ENST00000378512 TNCP24821 2201 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 TRAV41A0A0B4J266 112 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 PF4P02776 101 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 RRASP10301 218 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 CBX5P45973 191 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 LUMP51884 338 aaPredicted RBP13.26□□□□□ -0.29
RER1-202ENST00000378512 RPS16P62249 146 aaKnown RBP13.26□□□□□ -0.29
RER1-202ENST00000378512 LCNL1Q6ZST4 164 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 OVCH2Q7RTZ1 564 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
RER1-202ENST00000378512 TCTEX1D1Q8N7M0 179 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 KLHL30-AS1Q8NEE0 82 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 PARP11Q9NR21 331 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 RBM7Q9Y580 266 aaKnown RBP13.26□□□□□ -0.29
RER1-202ENST00000378512 WSB1Q9Y6I7 421 aa13.26□□□□□ -0.29
RER1-202ENST00000378512 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
RER1-202ENST00000378512 SOX15O60248 233 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 MYCNOSP40205 109 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 KRTAP10-11P60412 298 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 MSMO1Q15800 293 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 MRGPRG-AS1Q2M3A8 158 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 AKIRIN2Q53H80 203 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 PPP1R27Q86WC6 154 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 BVESQ8NE79 360 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 ACOT12Q8WYK0 555 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
RER1-202ENST00000378512 KLK15Q9H2R5 256 aa13.25□□□□□ -0.29
RER1-202ENST00000378512 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms