RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FAM90A23PA8MXZ1 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 HSPB1P04792 205 aaKnown RBP12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 G6PCP35575 357 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-201ENST00000378156 MELTFP08582 738 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 SCTP09683 121 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 DDTP30046 118 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 PSMB2P49721 201 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 RUNX1Q01196 453 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 C1QL2Q7Z5L3 287 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 OR8G5Q8NG78 346 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 ITLN1Q8WWA0 313 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 KIF26BQ2KJY2 2108 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 CXorf65A6NEN9 183 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM157CP0CG43 387 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 MRPL54Q6P161 138 aaKnown RBP12.91□□□□□ -0.34
NPHP4-201ENST00000378156 SPNS3Q6ZMD2 512 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 OR4P4Q8NGL7 312 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 OR1L1Q8NH94 360 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM171Q8WVE6 324 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
NPHP4-201ENST00000378156 CCL13Q99616 98 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 DOK5Q9P104 306 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 DMRT1Q9Y5R6 373 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 PLXNA3P51805 1871 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 MPTX1A8MV57 137 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 OR2H2O95918 312 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 PERPQ96FX8 193 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 PKIBQ9C010 78 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 TLNRD1Q9H1K6 362 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 ZNF703Q9H7S9 590 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-201ENST00000378156 NAGKQ9UJ70 344 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 ROS1P08922 2347 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 CDK2AP1O14519 115 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 SRSF10O75494 262 aaKnown RBP12.9□□□□□ -0.34
NPHP4-201ENST00000378156 ORM2P19652 201 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 COL8A1P27658 744 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 MPV17P39210 176 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 NFAM1Q8NET5 270 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-201ENST00000378156 GFI1Q99684 422 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 LINC00271P0C7V0 271 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 HKR1P10072 659 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-201ENST00000378156 DOLPP1Q86YN1 238 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 SGMS2Q8NHU3 365 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM54Q969K7 222 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 CDC42EP3Q9UKI2 254 aa12.9□□□□□ -0.34
NPHP4-201ENST00000378156 C16orf82Q7Z2V1 217 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 CYB561D1Q8N8Q1 229 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 A0A1W2PPE3 182 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 ZIC3O60481 467 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 HBZP02008 142 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 KLF14Q8TD94 323 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-201ENST00000378156 Q96M66 194 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 CD8AP01732 235 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 CELA3AP09093 270 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 CEACAM1P13688 526 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 GPR6P46095 362 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-201ENST00000378156 PMCHL1Q16048 86 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 AQP10Q96PS8 301 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 HSF4Q9ULV5 492 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 F2RL2O00254 374 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 RHBDL1O75783 438 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 ID4P47928 161 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 TMEM252Q8N6L7 170 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 MESP1Q9BRJ9 268 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 LINC00470Q9BZP3 86 aa12.89□□□□□ -0.35
NPHP4-201ENST00000378156 PTPRDP23468 1912 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 RAB29O14966 203 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 C12orf54Q6X4T0 127 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 ABHD14BQ96IU4 210 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
NPHP4-201ENST00000378156 TUBD1Q9UJT1 453 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
NPHP4-201ENST00000378156 UMODP07911 640 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 MST1P26927 711 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 CXorf66Q5JRM2 361 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-201ENST00000378156 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 EP400Q96L91 3159 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 TRGC2P03986 189 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 CDX1P47902 265 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-201ENST00000378156 GRAMD2BQ96HH9 432 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 CISD1Q9NZ45 108 aaKnown RBP12.88□□□□□ -0.35
NPHP4-201ENST00000378156 ZFP30Q9Y2G7 519 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 OR1L8Q8NGR8 309 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 DLL3Q9NYJ7 618 aa12.88□□□□□ -0.35
NPHP4-201ENST00000378156 ZNF716A6NP11 495 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 F5H697 171 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 SIAH2O43255 324 aa12.87□□□□□ -0.35
NPHP4-201ENST00000378156 LGALS7P47929 136 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms