RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 TSNAXQ99598 290 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-203ENST00000377808 ETV7Q9Y603 341 aa9.06□□□□□ -0.96
SMARCE1-203ENST00000377808 NOTCH1P46531 2555 aa9.06□□□□□ -0.96
SMARCE1-203ENST00000377808 CCL24O00175 119 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 FCN1O00602 326 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SLC25A17O43808 307 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 PROP1O75360 226 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 DUS4LO95620 317 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 DIRAS3O95661 229 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 FCER2P06734 321 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 NFYAP23511 347 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SLC6A1P30531 599 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 ARPC4P59998 168 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 CX3CL1P78423 397 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 NDPQ00604 133 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 CFHR3Q02985 330 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 PSG5Q15238 335 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SRSF7Q16629 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 RTL8BQ17RB0 113 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 ZNF660Q6AZW8 331 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 H1FOOQ8IZA3 346 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 BVESQ8NE79 360 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 CASTOR1Q8WTX7 329 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SLC25A38Q96DW6 304 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 RAX2Q96IS3 184 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 HARBI1Q96MB7 349 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 RNF5Q99942 180 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 FAM103A1Q9BTL3 118 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 TOLLIPQ9H0E2 274 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 DIABLOQ9NR28 239 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SHOXO15266 292 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 TUSC2O75896 110 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SPDEFO95238 335 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 CNIH1O95406 144 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 PSMB8P28062 276 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 HOXD3P31249 432 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 CDX1P47902 265 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 SCAND1P57086 179 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 UNQ5815/PRO19632Q6UWF5 114 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 Q6ZS49 121 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 REC114Q7Z4M0 266 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 GRPEL2Q8TAA5 225 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 YIPF6Q96EC8 236 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 C5orf30Q96GV9 206 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 DCSTAMPQ9H295 470 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 KLK15Q9H2R5 256 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 AURKAIP1Q9NWT8 199 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 GAB2Q9UQC2 676 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 FBXO7Q9Y3I1 522 aa9.05□□□□□ -0.96
SMARCE1-203ENST00000377808 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 SSX5O60225 188 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 CTXN2P0C2S0 81 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 LUMP51884 338 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 TMEM267Q0VDI3 215 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 OR2B11Q5JQS5 317 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 CNIH2Q6PI25 160 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 CROCCP3Q8IVE0 287 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 GVQW1Q8N7I0 195 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 RNF152Q8N8N0 203 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 ARPC1AQ92747 370 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 DCUN1D5Q9BTE7 237 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 MCRIP2Q9BUT9 160 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 GPR61Q9BZJ8 451 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 GNB4Q9HAV0 340 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 ZNF355PQ9NSJ1 428 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 ANXA10Q9UJ72 324 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 ZNF580Q9UK33 172 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 SPATA2Q9UM82 520 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 VSIG4Q9Y279 399 aa9.04□□□□□ -0.96
SMARCE1-203ENST00000377808 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 MEIS3P1A6NDR6 274 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 CRYZL1O95825 349 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 RRASP10301 218 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 PTHLHP12272 177 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 CD40LGP29965 261 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 RPS19P39019 145 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 RAB9AP51151 201 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 FXYD3Q14802 87 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 ACTBL2Q562R1 376 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 UBE2NLQ5JXB2 153 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 SAMD12Q8N8I0 201 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 LFNGQ8NES3 379 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 BEST4Q8NFU0 473 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 OR11H1Q8NG94 326 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 OR5M8Q8NGP6 311 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 ADTRPQ96IZ2 230 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 MS4A10Q96PG2 267 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 P2RX4Q99571 388 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 OR2W1Q9Y3N9 320 aa9.03□□□□□ -0.96
SMARCE1-203ENST00000377808 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.97
SMARCE1-203ENST00000377808 A0A0A6YYH2 397 aa9.02□□□□□ -0.97
SMARCE1-203ENST00000377808 A6NJ64 397 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms