RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 TP53I11O14683 189 aa9.73□□□□□ -0.85
TM9SF2-201ENST00000376387 IFNA1P01562 189 aa9.73□□□□□ -0.85
TM9SF2-201ENST00000376387 SERF2P84101 59 aa9.73□□□□□ -0.85
TM9SF2-201ENST00000376387 ZNF585BQ52M93 769 aa9.73□□□□□ -0.85
TM9SF2-201ENST00000376387 CLDN23Q96B33 292 aa9.73□□□□□ -0.85
TM9SF2-201ENST00000376387 RHBDL1O75783 438 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 CRYABP02511 175 aaKnown RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 ARL3P36405 182 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 RPL29P47914 159 aaKnown RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 ERVFC1-1P60608 527 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 ARF1P84077 181 aaKnown RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 AAED1Q7RTV5 226 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 R4GN57 208 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 M0R143 59 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 FKBP2P26885 142 aaKnown RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 DSCR4P56555 118 aaPredicted RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 SLC38A11Q08AI6 406 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 PCOLCEQ15113 449 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 IQCJQ1A5X6 159 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 TCF23Q7RTU1 214 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 TDHQ8IZJ6 230 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 KIR2DS1A0A191URI9 304 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 CXCL13O43927 109 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 PAGE4O60829 102 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 GGCTO75223 188 aaKnown RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 CRYAAP02489 173 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 IL3RAP26951 378 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 KIR2DS4P43632 304 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 CNN1P51911 297 aaKnown RBP9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 CLDN15P56746 228 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 KIR2DS1Q14954 304 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 FBXW9Q5XUX1 488 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 CPT1CQ8TCG5 803 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 NINJ1Q92982 152 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 LPAR2Q9HBW0 351 aa9.72□□□□□ -0.85
TM9SF2-201ENST00000376387 A0A096LPE4 126 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 TRAV24A0A0B4J272 114 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 A0A1W2PPZ6 126 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 PSMB3P49720 205 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 TFF3Q07654 80 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 CST9LP1Q5W188 147 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 RNF150Q9ULK6 438 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 CEP192Q8TEP8 1941 aa9.71□□□□□ -0.85
TM9SF2-201ENST00000376387 M0QZK8 103 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 CRYGCP07315 174 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 HBG1P69891 147 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 HBG2P69892 147 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM53AQ6NSI3 398 aaPredicted RBP9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 DPF1Q92782 380 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 SDSLQ96GA7 329 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 UBE2ZQ9H832 354 aaPredicted RBP9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.86
TM9SF2-201ENST00000376387 B3GALT5-AS1P59052 145 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 RPL19P84098 196 aaKnown RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 C1QTNF5Q9BXJ0 243 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 GPR35Q9HC97 309 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 A0A1W2PQM1 296 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 GRIFINA4D1Z8 144 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 CLDN1O95832 211 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 SLC25A6P12236 298 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 RPL15P61313 204 aaKnown RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 SRSF7Q16629 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 GUSBP11Q6P575 273 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 GGNQ86UU5 652 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 OR10G9Q8NGN4 311 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 OR10G7Q8NGN6 311 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 PINX1Q96BK5 328 aaKnown RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 FOXJ2Q9P0K8 574 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 RARRES3Q9UL19 164 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF503-AS2A6NEH8 195 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF705FA8MVS1 300 aaPredicted RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 TRAPPC2LH3BP13 241 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 KLRC4-KLRK1H3BQV0 150 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 SNAI2O43623 268 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 RFPL3SP0C7P2 107 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF705DP0CH99 300 aaPredicted RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 ZNF705BP0CI00 300 aaPredicted RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 TNFSF10P50591 281 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 FOXG1P55316 489 aaPredicted RBP9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 TBX15Q96SF7 602 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 PRRG4Q9BZD6 226 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 RAB9BQ9NP90 201 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 OCIAD1Q9NX40 245 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 CLN8Q9UBY8 286 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 KCNS2Q9ULS6 477 aa9.7□□□□□ -0.86
TM9SF2-201ENST00000376387 KIR2DL5BA0A0G2JN68 375 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 KIR2DL5BA0A0G2JPC4 375 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A10PA6NDY2 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
TM9SF2-201ENST00000376387 FAM90A8PA6NJQ4 464 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms