RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 BEND2Q8NDZ0 799 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 OR5M8Q8NGP6 311 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 OR10X1Q8NGY0 326 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 TCTEX1D2Q8WW35 142 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 CREBBPQ92793 2442 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 ST6GAL2Q96JF0 529 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 Q96MF0 132 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 UNKLQ9H9P5 680 aaKnown RBP8.51□□□□□ -1.05
PDPN-203ENST00000376061 INSIG2Q9Y5U4 225 aa8.51□□□□□ -1.05
PDPN-203ENST00000376061 TOR1AO14656 332 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 SMAD7O15105 426 aaKnown RBP8.5□□□□□ -1.05
PDPN-203ENST00000376061 ADAP1O75689 374 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 SIX6O95475 246 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 HOXB4P17483 251 aaPredicted RBP8.5□□□□□ -1.05
PDPN-203ENST00000376061 HLA-GP17693 338 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 H2BFSP57053 126 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 BRWD1-AS2P59051 145 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 HLA-DRB5Q30154 266 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 ZNF585BQ52M93 769 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 TMEM268Q5VZI3 342 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 NCR3LG1Q68D85 454 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 FAM71F2Q6NXP2 309 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 LGI3Q8N145 548 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 DRAXINQ8NBI3 349 aaPredicted RBP8.5□□□□□ -1.05
PDPN-203ENST00000376061 OR11H6Q8NGC7 330 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 OR4P4Q8NGL7 312 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 OR13D1Q8NGV5 346 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 DDB2Q92466 427 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 ST6GALNAC6Q969X2 333 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 C18orf12Q96KH6 178 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 TMEM56Q96MV1 263 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 TBX15Q96SF7 602 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 S1PR3Q99500 378 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 MRPL20Q9BYC9 149 aaKnown RBP8.5□□□□□ -1.05
PDPN-203ENST00000376061 REG4Q9BYZ8 158 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 ZNF436Q9C0F3 470 aaPredicted RBP8.5□□□□□ -1.05
PDPN-203ENST00000376061 RANGRFQ9HD47 186 aaPredicted RBP8.5□□□□□ -1.05
PDPN-203ENST00000376061 RAB18Q9NP72 206 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 TMEM56-RWDD3S4R434 201 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 CCDC168Q8NDH2 2452 aa8.5□□□□□ -1.05
PDPN-203ENST00000376061 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 B4DSR2 109 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 RNASEK-C17orf49H0YIS7 233 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 RAMP3O60896 148 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 TOX4O94842 621 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 CDS2O95674 445 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 SERPINE2P07093 398 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 HOXB5P09067 269 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 THBS3P49746 956 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 PRRX1P54821 245 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 PAX8Q06710 450 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 DIAPH2-AS1Q14236 149 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 SELENOHQ8IZQ5 122 aaKnown RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 ZNF383Q8NA42 475 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 RBPMSQ93062 196 aaKnown RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 IL22RA2Q969J5 263 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 WDR89Q96FK6 387 aaPredicted RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 ADTRPQ96IZ2 230 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 FYTTD1Q96QD9 318 aaKnown RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 PCGF1Q9BSM1 259 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 CHIAQ9BZP6 476 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 HEXA-AS1Q9H8Q6 139 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 AMMECR1Q9Y4X0 333 aaPredicted RBP8.49□□□□□ -1.05
PDPN-203ENST00000376061 CSMD1Q96PZ7 3565 aa8.49□□□□□ -1.05
PDPN-203ENST00000376061 TRAV20A0A0B4J274 112 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 MPTX1A8MV57 137 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 BUB1B-PAK6H3BSN5 160 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 BOLA2-SMG1P6H3BVE0 249 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 OR2A4O95047 310 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 IGKV1-39P01597 117 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 IGKV1D-39P04432 117 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 ARG1P05089 322 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 GIPP09681 153 aaPredicted RBP8.48□□□□□ -1.05
PDPN-203ENST00000376061 IL3RAP26951 378 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 REG1BP48304 166 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 LDLRAD2Q5SZI1 272 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 GGNBP1Q5YKI7 109 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 LYZL2Q7Z4W2 148 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 ZNF695Q8IW36 515 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 TCTE3Q8IZS6 198 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 SPAG16Q8N0X2 631 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 TCTEX1D1Q8N7M0 179 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 MAPK1IP1LQ8NDC0 245 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 TMEM186Q96B77 213 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 OR2A7Q96R45 310 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 FOXC2Q99958 501 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 ZANQ9Y493 2812 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 DUXBA0A1W2PPF3 345 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 FAM25EA8MYX2 175 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 LY6LH3BQJ8 138 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 RBFOX2O43251 390 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDPN-203ENST00000376061 FCGR3BO75015 233 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 S1PR2O95136 353 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 CT45A6P0DMU7 189 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 CT45A5P0DMU8 189 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 CT45A7P0DMV0 189 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms