RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 OR1K1Q8NGR3 316 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 TAF15Q92804 592 aaKnown RBP eCLIP10.92□□□□□ -0.66
MSH5-204ENST00000375755 AURKAIP1Q9NWT8 199 aaPredicted RBP10.92□□□□□ -0.66
MSH5-204ENST00000375755 CACNG5Q9UF02 275 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 PTPRBP23467 1997 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 UBE2L5PA0A1B0GUS4 154 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 CD82P27701 267 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 LCN2P80188 198 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 ACSM6Q6P461 480 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 WDYHV1Q96HA8 205 aa10.92□□□□□ -0.66
MSH5-204ENST00000375755 GVINP1Q7Z2Y8 2422 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 GRIFINA4D1Z8 144 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 C1QTNF9BB2RNN3 333 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 NPPCP23582 126 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 TCF23Q7RTU1 214 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 OR10V1Q8NGI7 309 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 FAM173AQ9BQD7 235 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 VAMP5O95183 116 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 CDKN1AP38936 164 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 LHX2P50458 406 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
MSH5-204ENST00000375755 MAJINQ3KP22 176 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 PLCXD3Q63HM9 321 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 Q6ZS49 121 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 TMEM144Q7Z5S9 345 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 CMTM2Q8TAZ6 248 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
MSH5-204ENST00000375755 NEK7Q8TDX7 302 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 KCNE4Q8WWG9 221 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
MSH5-204ENST00000375755 HSPB6O14558 160 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 NAPSAO96009 420 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 IGKV1-39P01597 117 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 IGKV1D-39P04432 117 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 SERPINE2P07093 398 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 ADMP35318 185 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 FUT6P51993 359 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 HBG1P69891 147 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 HBG2P69892 147 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 PMP22Q01453 160 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 RNFT1Q5M7Z0 435 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 FBXW9Q5XUX1 488 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 ZNF611Q8N823 705 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 PIGCQ92535 297 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 BOKQ9UMX3 212 aaPredicted RBP10.9□□□□□ -0.66
MSH5-204ENST00000375755 GJE1A6NN92 205 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 PAGE4O60829 102 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 LINC00310P59036 64 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 UBE2NP61088 152 aaKnown RBP10.9□□□□□ -0.66
MSH5-204ENST00000375755 SPANXN5Q5MJ07 72 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 AAED1Q7RTV5 226 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 NUFIP2Q7Z417 695 aaKnown RBP10.9□□□□□ -0.66
MSH5-204ENST00000375755 C11orf42Q8N5U0 333 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 DEFB127Q9H1M4 99 aa10.9□□□□□ -0.66
MSH5-204ENST00000375755 SYNGR3O43761 229 aa10.9□□□□□ -0.67
MSH5-204ENST00000375755 SLC25A6P12236 298 aa10.9□□□□□ -0.67
MSH5-204ENST00000375755 MEOX1P50221 254 aa10.9□□□□□ -0.67
MSH5-204ENST00000375755 CLDN18P56856 261 aa10.9□□□□□ -0.67
MSH5-204ENST00000375755 PPP1CBP62140 327 aa10.9□□□□□ -0.67
MSH5-204ENST00000375755 PTPRZ1P23471 2315 aaPredicted RBP10.89□□□□□ -0.67
MSH5-204ENST00000375755 VENTXO95231 258 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 EGR1P18146 543 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 NBL1P41271 181 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 RAB7AP51149 207 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 PLGLB1Q02325 96 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 ZDHHC23Q8IYP9 409 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 NEIL1Q96FI4 390 aaPredicted RBP10.89□□□□□ -0.67
MSH5-204ENST00000375755 ZFP30Q9Y2G7 519 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 DOCK11Q5JSL3 2073 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 CD300LBA8K4G0 201 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 MLNRO43193 412 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 SP1P08047 785 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 SOX8P57073 446 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 SLC38A11Q08AI6 406 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 COL5A1-AS1Q5SY13 56 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 OR8G2PQ6IF36 304 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 VN1R17PQ8TDU5 208 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 IL36RNQ9UBH0 155 aa10.89□□□□□ -0.67
MSH5-204ENST00000375755 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 IGKV1-5P01602 117 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 WNT2P09544 360 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 TMEM183BQ1AE95 376 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 FAM27BQ5VT28 67 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 PCSK4Q6UW60 755 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 LINC01551Q86U37 167 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 TUSC5Q8IXB3 177 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 OR1F12Q8NHA8 337 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 VAMP8Q9BV40 100 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
MSH5-204ENST00000375755 OR51B6Q9H340 312 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 TNRC6AQ8NDV7 1962 aaKnown RBP10.88□□□□□ -0.67
MSH5-204ENST00000375755 hCG_38984A0A1B0GV85 526 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 AQP7O14520 342 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 C1QTNF9P0C862 333 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 DEFA4P12838 97 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms