RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PRSS27Q9BQR3 290 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 WDR83Q9BRX9 315 aaKnown RBP5.2□□□□□ -1.58
SCN2A-202ENST00000375427 SCNM1Q9BWG6 230 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 GNB1LQ9BYB4 327 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 FSCN3Q9NQT6 498 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 IL36RNQ9UBH0 155 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 NGFRP08138 427 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 CDKN1BP46527 198 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 KLHDC3Q9BQ90 382 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 THBDP07204 575 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 B4GALT1P15291 398 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 BTCP35070 178 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 FOXG1P55316 489 aaPredicted RBP5.2□□□□□ -1.58
SCN2A-202ENST00000375427 IFITM2Q01629 132 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 SLC25A11Q02978 314 aaKnown RBP5.2□□□□□ -1.58
SCN2A-202ENST00000375427 SMN1Q16637 294 aaKnown RBP5.2□□□□□ -1.58
SCN2A-202ENST00000375427 TMEM211Q6ICI0 200 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 COMMD6Q7Z4G1 85 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 DTX1Q86Y01 620 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 ORMDL3Q8N138 153 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 ADOQ96SZ5 270 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 GPR88Q9GZN0 384 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 CAMSAP1Q5T5Y3 1602 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 PLXND1Q9Y4D7 1925 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 PPIHO43447 177 aaKnown RBP5.2□□□□□ -1.58
SCN2A-202ENST00000375427 EDN1P05305 212 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 DUSP28Q4G0W2 176 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 C1orf53Q5VUE5 145 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 TSKUQ8WUA8 353 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 CXXC4Q9H2H0 198 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 TMEM242Q9NWH2 141 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 TMEM59LQ9UK28 342 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 RUSC2Q8N2Y8 1516 aa5.2□□□□□ -1.58
SCN2A-202ENST00000375427 KIAA0556O60303 1618 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 C9orf170A2RU37 121 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 C9JAW5 83 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 WNT7AO00755 349 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 TNFSF13O75888 250 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 AZU1P20160 251 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 MPLP40238 635 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CDKN3Q16667 212 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 DCAF12Q5T6F0 453 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 Q6AWC8 147 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 C5orf49A4QMS7 147 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 PITX3O75364 302 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 PRADC1Q9BSG0 188 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 MIXL1Q9H2W2 232 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 PLEKHB1Q9UF11 243 aaPredicted RBP5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CHD1O14646 1710 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CPS1P31327 1500 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 M0R381 172 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 RPS11P62280 158 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCN2A-202ENST00000375427 MRPL2Q5T653 305 aaKnown RBP5.19□□□□□ -1.58
SCN2A-202ENST00000375427 SSMEM1Q8WWF3 244 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 ZFP64Q9NPA5 681 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 PPIL1Q9Y3C6 166 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CDC42BPAQ5VT25 1732 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 GAPDHP04406 335 aaKnown RBP5.19□□□□□ -1.58
SCN2A-202ENST00000375427 UCP1P25874 307 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 GTSCR1Q86UQ5 136 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 LYG1Q8N1E2 194 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 A0A1B0GWJ7 208 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CD3EP07766 207 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CST5P28325 142 aaPredicted RBP5.19□□□□□ -1.58
SCN2A-202ENST00000375427 C6orf132Q5T0Z8 1188 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 LYPD8Q6UX82 237 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 ADAD2Q8NCV1 583 aaKnown RBP5.19□□□□□ -1.58
SCN2A-202ENST00000375427 TNFRSF19Q9NS68 423 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 PRNDQ9UKY0 176 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 OVOS2A0A0J9YW53 1432 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 A0A1B0GX51 115 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 A6NED7 52 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 PAQR9Q6ZVX9 377 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 ST6GALNAC6Q969X2 333 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 ATP7AQ04656 1500 aa5.19□□□□□ -1.58
SCN2A-202ENST00000375427 CCL16O15467 120 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 ZNF138P52744 262 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 OR52N5Q8NH56 324 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 PATE1Q8WXA2 126 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 ITSN1Q15811 1721 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 NDUFC2-KCTD14E9PQ53 114 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 HYPMO75409 117 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 HLA-DQB1P01920 261 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 PNLIPP16233 465 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 TRA2BP62995 288 aaKnown RBP5.18□□□□□ -1.58
SCN2A-202ENST00000375427 SCAMP5Q8TAC9 235 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 KISS1RQ969F8 398 aaPredicted RBP5.18□□□□□ -1.58
SCN2A-202ENST00000375427 GP6Q9HCN6 339 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 SLAMF8Q9P0V8 285 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 ZNF319Q9P2F9 582 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 ATP23Q9Y6H3 246 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 CEP152O94986 1710 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 EML5Q05BV3 1969 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 IL18BPO95998 194 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 EWSR1Q01844 656 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN2A-202ENST00000375427 LINC00346Q8IVM7 164 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 C1QTNF4Q9BXJ3 329 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 SMPXQ9UHP9 88 aa5.18□□□□□ -1.58
SCN2A-202ENST00000375427 BAZ2AQ9UIF9 1905 aaKnown RBP5.18□□□□□ -1.58
SCN2A-202ENST00000375427 FGF18O76093 207 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms