RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
HMGCL-203ENST00000374490 VAX2Q9UIW0 290 aa11.68□□□□□ -0.54
HMGCL-203ENST00000374490 PCP4L1A6NKN8 68 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 LRRC30A6NM36 301 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 AP4M1O00189 453 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 SPINT2O43291 252 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 CECR9P0C854 216 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 GABRA2P47869 451 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 GLIPR1P48060 266 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 CEBPDP49716 269 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-203ENST00000374490 CEBPGP53567 150 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 HTD2P86397 168 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 P2RY6Q15077 328 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 PPP1R35Q8TAP8 253 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 TMEM242Q9NWH2 141 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 PROCRQ9UNN8 238 aa11.67□□□□□ -0.54
HMGCL-203ENST00000374490 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 SOX15O60248 233 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGCL-203ENST00000374490 AESQ08117 197 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 Q6ZS92 163 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 PIEZO2Q9H5I5 2752 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 SPTA1P02549 2419 aa11.66□□□□□ -0.54
HMGCL-203ENST00000374490 IGHV2OR16-5A0A0B4J2B6 119 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 ODAMA1E959 279 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 FAM90A9PA6NNJ1 464 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 WNT9BO14905 357 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 AGFG2O95081 481 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 RAB11AP62491 216 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 COL10A1Q03692 680 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 FABP9Q0Z7S8 132 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 VWA1Q6PCB0 445 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 LCN15Q6UWW0 184 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 ZNF826PQ6ZT77 177 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 ZNF808Q8N4W9 903 aaPredicted RBP11.65□□□□□ -0.54
HMGCL-203ENST00000374490 OR10P1Q8NGE3 313 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 OR13D1Q8NGV5 346 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 MRGPRDQ8TDS7 321 aa11.65□□□□□ -0.54
HMGCL-203ENST00000374490 ZFP92A6NM28 416 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 S1PR2O95136 353 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 G6PCP35575 357 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 RPS10P46783 165 aaKnown RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF816Q0VGE8 651 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 Q6ZR03 302 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 BHLHA15Q7RTS1 189 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CXorf67Q86X51 503 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CA5BP1Q8WTZ4 195 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 C5orf30Q96GV9 206 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF665Q9H7R5 613 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 SLC39A9Q9NUM3 307 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 ARID1AO14497 2285 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 C17orf112F2Z3M2 114 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 PTBP3O95758 552 aaKnown RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CYB5R3P00387 301 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 KRASP01116 189 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CRYABP02511 175 aaKnown RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 FBP1P09467 338 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 GZMHP20718 246 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 CFHR2P36980 270 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 OR2B8PP59922 312 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 ELOBQ15370 118 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 OR8G2PQ6IF36 304 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 LRRC29Q8WV35 223 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 LHX4Q969G2 390 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF251Q9BRH9 671 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 VSIRQ9H7M9 311 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 ZNF71Q9NQZ8 489 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-203ENST00000374490 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
HMGCL-203ENST00000374490 HECTD1Q9ULT8 2610 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 MAST4O15021 2626 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 A0A1W2PPE3 182 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 OR5H1A6NKK0 313 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 C17orf98A8MV24 154 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 C15orf65H3BRN8 121 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 RAMP3O60896 148 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 RND2P52198 227 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 ELLP55199 621 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-203ENST00000374490 GNB2P62879 340 aa11.63□□□□□ -0.55
HMGCL-203ENST00000374490 RPP30P78346 268 aaKnown RBP11.63□□□□□ -0.55
HMGCL-203ENST00000374490 KIAA0141Q14154 515 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms