RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 TMEM167AQ8TBQ9 72 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TCF19Q9Y242 345 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 J3QRK9 145 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 M0QYG6 137 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 HILS1P60008 231 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR4S2Q8NH73 311 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CELSR2Q9HCU4 2923 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 BRS3P32247 399 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 FAM71E2Q8N5Q1 922 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 ZNF114Q8NC26 417 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 JMJD8Q96S16 334 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR2D2Q9H210 308 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 C14orf166Q9Y224 244 aaKnown RBP8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 LRRK2Q5S007 2527 aa8.95□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CYSRT1A8MQ03 144 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 SCAF4O95104 1147 aaKnown RBP8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 HLA-DRB1P01911 266 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 IGHV4-38-2P0DP08 117 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 LYL1P12980 280 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 GMFBP60983 142 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 NMSQ5H8A3 153 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR4C13Q8NGP0 309 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR2T10Q8NGZ9 312 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 PTPN13Q12923 2485 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 COL12A1Q99715 3063 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 SEC22AQ96IW7 307 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CCL28Q9NRJ3 127 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 C3orf85A0A1B0GTC6 90 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 C9orf170A2RU37 121 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CREBL2O60519 120 aaPredicted RBP8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 MOSP00540 346 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 DYNAPQ8N1N2 210 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 VSTM2AQ8TAG5 236 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 ZNF431Q8TF32 576 aaPredicted RBP8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 LHX4Q969G2 390 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TOMM40LQ969M1 308 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 ZNF48Q96MX3 618 aaPredicted RBP8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TSNAXQ99598 290 aaKnown RBP8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 C11orf1Q9H5F2 150 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 PRELID3BQ9Y3B1 194 aa8.94□□□□□ -0.98
CSGALNACT2-201ENST00000374466 LINC00473A8K010 186 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 H2AFB2P0C5Z0 115 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 BSXQ3C1V8 233 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CENPSQ8N2Z9 138 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 GLYATL2Q8WU03 294 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 PITPNC1Q9UKF7 332 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TMED3Q9Y3Q3 217 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 A0A1W2PRD5 423 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 A0A1W2PRF3 423 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 A0A1W2PRM7 423 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 H3BUA1 57 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 VSIG10L2P0DP72 767 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 NFYAP23511 347 aaPredicted RBP8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 RTL8BQ17RB0 113 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 ZNF57Q68EA5 555 aaPredicted RBP8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TBC1D26Q86UD7 250 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR10X1Q8NGY0 326 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 MARCH1Q8TCQ1 289 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 SSMEM1Q8WWF3 244 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 MAFIPQ8WZ33 124 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 BET1O15155 118 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 ANXA3P12429 323 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 RPL30P62888 115 aaKnown RBP8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 NRARPQ7Z6K4 114 aa8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 MRPL20Q9BYC9 149 aaKnown RBP8.93□□□□□ -0.98
CSGALNACT2-201ENST00000374466 IFNA2P01563 188 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 IGKV1-39P01597 117 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 IGKV1D-39P04432 117 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 IGF1P05019 195 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR4E1P0C645 316 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CFHR3Q02985 330 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 C16orf87Q6PH81 154 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 SELENOHQ8IZQ5 122 aaKnown RBP8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 FYTTD1Q96QD9 318 aaKnown RBP8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 DOPEY2Q9Y3R5 2298 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TRAV39A0A0B4J263 110 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 A0A1B0GU03 582 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 SNAPC5O75971 98 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 APOA2P02652 100 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 FAM106CPP0CH98 169 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 COMPP49747 757 aaPredicted RBP8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 CLEC9AQ6UXN8 241 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 SGPP2Q8IWX5 399 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TMEM14BQ9NUH8 114 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 VPREB3Q9UKI3 123 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 MEIS3P1A6NDR6 274 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR2A4O95047 310 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 HRASP01112 189 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 INPP1P49441 399 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 PIGPP57054 158 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 OR2A7Q96R45 310 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 DOCK11Q5JSL3 2073 aa8.92□□□□□ -0.98
CSGALNACT2-201ENST00000374466 TSPAN5P62079 268 aa8.91□□□□□ -0.98
CSGALNACT2-201ENST00000374466 LGI3Q8N145 548 aa8.91□□□□□ -0.98
CSGALNACT2-201ENST00000374466 RFESDQ8TAC1 157 aa8.91□□□□□ -0.98
CSGALNACT2-201ENST00000374466 RPEQ96AT9 228 aa8.91□□□□□ -0.98
CSGALNACT2-201ENST00000374466 C1RLQ9NZP8 487 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms