RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF808Q8N4W9 903 aaPredicted RBP10.33□□□□□ -0.76
PRPF4-202ENST00000374199 COMMD1Q8N668 190 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 CTSZQ9UBR2 303 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 CARHSP1Q9Y2V2 147 aaKnown RBP10.33□□□□□ -0.76
PRPF4-202ENST00000374199 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
PRPF4-202ENST00000374199 PPIAL4EA0A075B759 164 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 PPIAL4DF5H284 164 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 PPIAL4FP0DN26 164 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 PXDC1Q5TGL8 231 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF429Q86V71 674 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 SPAG16Q8N0X2 631 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 C11orf42Q8N5U0 333 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 C8orf46Q8TAG6 207 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 PPIAL4AQ9Y536 164 aa10.33□□□□□ -0.76
PRPF4-202ENST00000374199 ARFGEF3Q5TH69 2177 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 SVILO95425 2214 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 RELNP78509 3460 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 IGHV3-43A0A0B4J1X8 118 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 NKX6-3A6NJ46 265 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 IGHV3-43DP0DP04 118 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 IRF2P14316 349 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 ID4P47928 161 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 UBE2KP61086 200 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 NDRG3Q9UGV2 375 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 RNF150Q9ULK6 438 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 SESN1Q9Y6P5 492 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
PRPF4-202ENST00000374199 CADP27708 2225 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
PRPF4-202ENST00000374199 ADCYAP1P18509 176 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 DYNLT3P51808 116 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 IZUMO4Q1ZYL8 232 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 CLEC9AQ6UXN8 241 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF841Q6ZN19 808 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 RFESDQ8TAC1 157 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 MAGT1Q9H0U3 335 aa10.32□□□□□ -0.76
PRPF4-202ENST00000374199 hADV38S2A0JD32 116 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 MARCH11A6NNE9 402 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 DLL1O00548 723 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 MMP23AO75900 390 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 PLAUP00749 431 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 IGHV2-70P01814 119 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 IGFBP2P18065 325 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 GPR12P47775 334 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 F2RL1P55085 397 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF525Q8N782 197 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 GALNT11Q8NCW6 608 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 BPIFCQ8NFQ6 507 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 SH3BGRL3Q9H299 93 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 RBKSQ9H477 322 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.31□□□□□ -0.76
PRPF4-202ENST00000374199 C19orf12Q9NSK7 152 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 PIEZO2Q9H5I5 2752 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 PRSS46E5RG02 174 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 G6PCP35575 357 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 BTNL3Q6UXE8 466 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 OR5C1Q8NGR4 320 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 ADTRPQ96IZ2 230 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 PSMG3Q9BT73 122 aaPredicted RBP10.31□□□□□ -0.76
PRPF4-202ENST00000374199 SLC25A10Q9UBX3 287 aaPredicted RBP10.31□□□□□ -0.76
PRPF4-202ENST00000374199 CACNA1DQ01668 2161 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 B8ZZF3 427 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 MED6O75586 246 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 SCAF4O95104 1147 aaKnown RBP10.31□□□□□ -0.76
PRPF4-202ENST00000374199 RBP4P02753 201 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 RPL23AP62750 156 aaKnown RBP10.31□□□□□ -0.76
PRPF4-202ENST00000374199 TMEM155Q4W5P6 130 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 DTX2Q86UW9 622 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 OR2G3Q8NGZ4 309 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 TCTEX1D2Q8WW35 142 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 ST6GALNAC6Q969X2 333 aa10.31□□□□□ -0.76
PRPF4-202ENST00000374199 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 TRAV1-1A0A0B4J248 108 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 TMEM218A2RU14 115 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF705EA8MWA4 302 aaPredicted RBP10.3□□□□□ -0.76
PRPF4-202ENST00000374199 DFFBO76075 338 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 DAOP14920 347 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 RELBQ01201 579 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF273Q14593 569 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 ALKBH2Q6NS38 261 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 ZCCHC24Q8N2G6 241 aaKnown RBP10.3□□□□□ -0.76
PRPF4-202ENST00000374199 BOLLQ8N9W6 283 aaKnown RBP10.3□□□□□ -0.76
PRPF4-202ENST00000374199 GAL3ST2Q9H3Q3 398 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 IGHV1-69-2A0A0G2JMI3 117 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 ATP6V0CP27449 155 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 THBS3P49746 956 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 GNB2P62879 340 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 PMS2P11Q13670 270 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 RPL39P5Q59GN2 51 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 ZNF383Q8NA42 475 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 GNPNAT1Q96EK6 184 aaPredicted RBP10.3□□□□□ -0.76
PRPF4-202ENST00000374199 POLEQ07864 2286 aa10.3□□□□□ -0.76
PRPF4-202ENST00000374199 SNCAP37840 140 aa10.29□□□□□ -0.76
PRPF4-202ENST00000374199 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms