RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 ASCL3Q9NQ33 180 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 LYRM2Q9NU23 88 aaPredicted RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 GAR1Q9NY12 217 aaKnown RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 IL36GQ9NZH8 169 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 IGHV3-72A0A0B4J1Y9 119 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 PQLC2LA1A4F0 135 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 DNASE2O00115 360 aaPredicted RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 PPIHO43447 177 aaKnown RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 MBP02144 154 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 TNFRSF1AP19438 455 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 GZMHP20718 246 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 WNT5AP41221 380 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 DEFA6Q01524 100 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 ZDHHC16Q969W1 377 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 MARVELD3Q96A59 401 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 SLC35E1Q96K37 410 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 RHOVQ96L33 236 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 HSD17B10Q99714 261 aaKnown RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 TRAV20A0A0B4J274 112 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 C12orf77C9JDV5 145 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 F6UZH7 168 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 PITX3O75364 302 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 CA11O75493 328 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 HLA-GP17693 338 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 P2RY6Q15077 328 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 ARSJQ5FYB0 599 aaPredicted RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 WDR25Q64LD2 544 aaPredicted RBP6.6□□□□□ -1.35
HERC4-202ENST00000373700 LINC00470Q9BZP3 86 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 TOLLIPQ9H0E2 274 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 RBKSQ9H477 322 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 WFDC1Q9HC57 220 aa6.6□□□□□ -1.35
HERC4-202ENST00000373700 TRAV24A0A0B4J272 114 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 ZNF98A6NK75 572 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 NDUFB3O43676 98 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 SMPD2O60906 423 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 LINC00205P59089 165 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 CCL20P78556 96 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 BSXQ3C1V8 233 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 ABHD12Q8N2K0 398 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 C15orf54Q8N8G6 183 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 OR5D13Q8NGL4 314 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 TUBG2Q9NRH3 451 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 SLC35D1Q9NTN3 355 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 OR6C3Q9NZP0 311 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 USP9YO00507 2555 aaPredicted RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 ABCA2Q9BZC7 2435 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 TRAV38-1A0A0B4J264 116 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 TSTD3H0UI37 97 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 CD3EP07766 207 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 CD55P08174 381 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 NAT1P18440 290 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 GABRA6Q16445 453 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 MRPL30Q8TCC3 161 aaKnown RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 TMEM45BQ96B21 275 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 SNRNP40Q96DI7 357 aaKnown RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 LIME1Q9H400 295 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 CYTL1Q9NRR1 136 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 ODAMA1E959 279 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 C11orf94C9JXX5 98 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 HRASP01112 189 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 OR4A8P0C604 315 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 OTX1P32242 354 aaPredicted RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 OPRK1P41145 380 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 MEOX2P50222 304 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 UCP3P55916 312 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 RPL39P5Q59GN2 51 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 FAM78BQ5VT40 261 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 PKIBQ9C010 78 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 KIAA1456Q9P272 454 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 RNF7Q9UBF6 113 aa6.59□□□□□ -1.35
HERC4-202ENST00000373700 SONP18583 2426 aaKnown RBP6.59□□□□□ -1.35
HERC4-202ENST00000373700 C17orf98A8MV24 154 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM157AC9JC47 383 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 COX5BP10606 129 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 NTF3P20783 257 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 GALR1P47211 349 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 TCL1AP56279 114 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 ERVFC1-1P60608 527 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 OR4P4Q8NGL7 312 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 OR13A1Q8NGR1 328 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 DAZAP1Q96EP5 407 aaKnown RBP6.58□□□□□ -1.36
HERC4-202ENST00000373700 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 ZNF251Q9BRH9 671 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM103A1Q9BTL3 118 aaKnown RBP6.58□□□□□ -1.36
HERC4-202ENST00000373700 CRIM1Q9NZV1 1036 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A10PA6NDY2 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A20PA6NIJ5 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A8PA6NJQ4 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A7PA6NKC0 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A22PA8MWA6 464 aa6.58□□□□□ -1.36
HERC4-202ENST00000373700 FAM90A12PA8MX19 464 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms