RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 BEND4Q6ZU67 534 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 SEM1Q6ZVN7 128 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 CENPVQ7Z7K6 275 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-206ENST00000373571 RPP25LQ8N5L8 163 aaKnown RBP13.93□□□□□ -0.18
HDAC8-206ENST00000373571 P2RX4Q99571 388 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 AGMATQ9BSE5 352 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 SLC39A9Q9NUM3 307 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 DUSP13Q9UII6 198 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 INTS1Q8N201 2190 aaKnown RBP13.93□□□□□ -0.18
HDAC8-206ENST00000373571 B4DEV8 164 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 AP4M1O00189 453 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 ZNF737O75373 536 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 CXCL1P09341 107 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 ERVFRD-1P60508 538 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 MSMPQ1L6U9 139 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 ALKBH2Q6NS38 261 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 ACSM6Q6P461 480 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 LRP11Q86VZ4 500 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 OR10P1Q8NGE3 313 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 LHX4Q969G2 390 aa13.93□□□□□ -0.18
HDAC8-206ENST00000373571 CIB3Q96Q77 187 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-206ENST00000373571 MRPL37Q9BZE1 423 aaKnown RBP13.93□□□□□ -0.18
HDAC8-206ENST00000373571 USF3Q68DE3 2245 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 MBD3L4A6NDZ8 208 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-206ENST00000373571 MBD3L3A6NE82 208 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-206ENST00000373571 MBD3L5A6NJ08 208 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-206ENST00000373571 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 SRRM5B3KS81 715 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 FGF7P21781 194 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
HDAC8-206ENST00000373571 PNRC1Q12796 327 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-206ENST00000373571 SPINK9Q5DT21 86 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 FAM169BQ8N8A8 192 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 MBD3L2Q8NHZ7 208 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-206ENST00000373571 PTPRBP23467 1997 aa13.92□□□□□ -0.18
HDAC8-206ENST00000373571 CACNA1DQ01668 2161 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 IGKV1D-17A0A075B6S4 117 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 CEACAM4O75871 244 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 SMIM6P0DI80 62 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 GPR12P47775 334 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 ZNF83P51522 516 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 ZADH2Q8N4Q0 377 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 EDARADDQ8WWZ3 215 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 HEATR1Q9H583 2144 aaKnown RBP13.91□□□□□ -0.18
HDAC8-206ENST00000373571 S100A9P06702 114 aaKnown RBP13.91□□□□□ -0.18
HDAC8-206ENST00000373571 ZNF674Q2M3X9 581 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 NCR3LG1Q68D85 454 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 R3HDM4Q96D70 268 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 PLPPR2Q96GM1 343 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 SEBOXQ9HB31 216 aaPredicted RBP13.91□□□□□ -0.18
HDAC8-206ENST00000373571 GNG12Q9UBI6 72 aa13.91□□□□□ -0.18
HDAC8-206ENST00000373571 IGHV3OR15-7A0A075B7D8 119 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 TGIF2-C20orf24A0A0A6YYL0 155 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 M0R1B8 84 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 PLA2G5P39877 138 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 TFF3Q07654 80 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 SLC16A13Q7RTY0 426 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 SLC25A22Q9H936 323 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 HMGB3O15347 200 aaKnown RBP13.9□□□□□ -0.18
HDAC8-206ENST00000373571 GZMHP20718 246 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 DUTP33316 252 aaKnown RBP13.9□□□□□ -0.18
HDAC8-206ENST00000373571 PMS2P11Q13670 270 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 KIAA0141Q14154 515 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-206ENST00000373571 MORN2Q502X0 79 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 GCSAMQ8N6F7 178 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 NANPQ8TBE9 248 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 SNX22Q96L94 193 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 TCEAL7Q9BRU2 100 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 QTRT1Q9BXR0 403 aaKnown RBP13.9□□□□□ -0.18
HDAC8-206ENST00000373571 SDF2L1Q9HCN8 221 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 JPT1Q9UK76 154 aa13.9□□□□□ -0.18
HDAC8-206ENST00000373571 CTXND1A0A1B0GTU2 59 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 MGST3O14880 152 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 FCGR3BO75015 233 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 MBP02144 154 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 SPRNQ5BIV9 151 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 FFAR4Q5NUL3 377 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 IGF2-ASQ6U949 168 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 FAM90A1Q86YD7 464 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 OR10G9Q8NGN4 311 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 OR10G7Q8NGN6 311 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 PPP1R35Q8TAP8 253 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 S100PBPQ96BU1 408 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 OR2V2Q96R30 315 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 NPCDR1Q9BY65 106 aa13.89□□□□□ -0.19
HDAC8-206ENST00000373571 CYB5BO43169 146 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 PROP1O75360 226 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 CYB5R3P00387 301 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-206ENST00000373571 OR9G9P0C7N8 305 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 VWC2Q2TAL6 325 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 TMPRSS5Q9H3S3 457 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 DOCK11Q5JSL3 2073 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 IGHV3-13P01766 116 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 CD81P60033 236 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 S100A12P80511 92 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 MEF2BQ02080 365 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-206ENST00000373571 TIMM23BQ5SRD1 257 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 NCMAPQ5T1S8 102 aa13.88□□□□□ -0.19
HDAC8-206ENST00000373571 WDR25Q64LD2 544 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-206ENST00000373571 ZNF474Q6S9Z5 364 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms