RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 LAMP3Q9UQV4 416 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 ZNF134P52741 427 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 BRWD1-AS2P59051 145 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 SRSF3P84103 164 aaKnown RBP20.66■□□□□ 0.9
CTSA-203ENST00000372459 CD300LFQ8TDQ1 290 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 RAB40CQ96S21 281 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 WFDC1Q9HC57 220 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 TREM1Q9NP99 234 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 IDI2-AS1Q9NZ38 188 aa20.66■□□□□ 0.9
CTSA-203ENST00000372459 IGHV1-69-2A0A0G2JMI3 117 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 S1PR2O95136 353 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 TMEM50AO95807 157 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 DUTP33316 252 aaKnown RBP20.65■□□□□ 0.9
CTSA-203ENST00000372459 ABHD14AQ9BUJ0 271 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 IFI27L2Q9H2X8 130 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 LINC00312Q9Y6C7 94 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 FLI1Q01543 452 aaPredicted RBP20.65■□□□□ 0.9
CTSA-203ENST00000372459 TFF3Q07654 80 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 BAXQ07812 192 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 ARV1Q9H2C2 271 aa20.65■□□□□ 0.9
CTSA-203ENST00000372459 SNAPINO95295 136 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 KRASP01116 189 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 IGHV3-7P01780 117 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 G6PCP35575 357 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 RPL23AP62750 156 aaKnown RBP20.64■□□□□ 0.89
CTSA-203ENST00000372459 MEF2CQ06413 473 aaPredicted RBP20.64■□□□□ 0.89
CTSA-203ENST00000372459 DHRS7BQ6IAN0 325 aaPredicted RBP20.64■□□□□ 0.89
CTSA-203ENST00000372459 TMEM204Q9BSN7 226 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 PARP11Q9NR21 331 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 GAB2Q9UQC2 676 aa20.64■□□□□ 0.89
CTSA-203ENST00000372459 SYNGR2O43760 224 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 PROP1O75360 226 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 MED6O75586 246 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 PAX9P55771 341 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 HRH4Q9H3N8 390 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 FAM90A26D6RGX4 464 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 M0R1X1 148 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 TNFRSF13BO14836 293 aaPredicted RBP20.63■□□□□ 0.89
CTSA-203ENST00000372459 FBXO24O75426 580 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 P0C879 139 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 NFYBP25208 207 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 LOXP28300 417 aaPredicted RBP20.63■□□□□ 0.89
CTSA-203ENST00000372459 WSB1Q9Y6I7 421 aa20.63■□□□□ 0.89
CTSA-203ENST00000372459 ARFGEF3Q5TH69 2177 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 MED19A0JLT2 244 aaPredicted RBP20.62■□□□□ 0.89
CTSA-203ENST00000372459 SLC31A2O15432 143 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 NDUFB3O43676 98 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 HFEQ30201 348 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 NCR3LG1Q68D85 454 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 BTNL8Q6UX41 500 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 LEAP2Q969E1 77 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 GINS3Q9BRX5 216 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 GAL3ST2Q9H3Q3 398 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 CACNA1AO00555 2505 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 PKDREJQ9NTG1 2253 aa20.62■□□□□ 0.89
CTSA-203ENST00000372459 F2RL1P55085 397 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 LINC00205P59089 165 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 RPL31P62899 125 aaKnown RBP20.61■□□□□ 0.89
CTSA-203ENST00000372459 ZNF266Q14584 549 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 RPL39P5Q59GN2 51 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 LRRC10Q5BKY1 277 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 CT45A1Q5HYN5 189 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.61■□□□□ 0.89
CTSA-203ENST00000372459 CT45A3Q8NHU0 189 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 USF3Q68DE3 2245 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 ODF3L1Q8IXM7 274 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 TMEM231Q9H6L2 316 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 C19orf12Q9NSK7 152 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 KAAG1Q9UBP8 84 aa20.61■□□□□ 0.89
CTSA-203ENST00000372459 SMG1Q96Q15 3661 aaKnown RBP20.61■□□□□ 0.89
CTSA-203ENST00000372459 RAB29O14966 203 aa20.6■□□□□ 0.89
CTSA-203ENST00000372459 NDUFA2O43678 99 aa20.6■□□□□ 0.89
CTSA-203ENST00000372459 OR10A7Q8NGE5 316 aa20.6■□□□□ 0.89
CTSA-203ENST00000372459 RPUSD1Q9UJJ7 312 aaKnown RBP20.6■□□□□ 0.89
CTSA-203ENST00000372459 COL6A6A6NMZ7 2263 aa20.6■□□□□ 0.89
CTSA-203ENST00000372459 FCGR3BO75015 233 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 CST7O76096 145 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 SEC11BP0C7V7 166 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 CLINT1Q14677 625 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 UTF1Q5T230 341 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 PRAMEF5Q5TYX0 476 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 LYPD2Q6UXB3 125 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 H2BFWTQ7Z2G1 175 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 STX12Q86Y82 276 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 ZNF295-AS1Q8N0V1 137 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 ZNF439Q8NDP4 499 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 LYPD6BQ8NI32 183 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 PRELID3BQ9Y3B1 194 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 DIDO1Q9BTC0 2240 aaKnown RBP20.59■□□□□ 0.89
CTSA-203ENST00000372459 TXNL1O43396 289 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 HPRT1P00492 218 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 PPOXP50336 477 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 TAS2R30P59541 319 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 MIDNQ504T8 468 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 OR5C1Q8NGR4 320 aa20.59■□□□□ 0.89
CTSA-203ENST00000372459 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.59■□□□□ 0.89
CTSA-203ENST00000372459 RBFOX2O43251 390 aaKnown RBP eCLIP20.58■□□□□ 0.89
CTSA-203ENST00000372459 CD5P06127 495 aa20.58■□□□□ 0.89
CTSA-203ENST00000372459 IAPPP10997 89 aa20.58■□□□□ 0.89
CTSA-203ENST00000372459 KIR2DS2P43631 304 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms