RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 TCF23Q7RTU1 214 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 ZNF837Q96EG3 531 aaPredicted RBP13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 IMMP2LQ96T52 175 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 THYN1Q9P016 225 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 K7EQM0 130 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 ETV2O00321 342 aaPredicted RBP13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 MRPL33O75394 65 aaKnown RBP13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 NEURL1O76050 574 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 PLP1P60201 277 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 HIST3H3Q16695 136 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 ST6GALNAC6Q969X2 333 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 FAM173AQ9BQD7 235 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
SEMA6C-202ENST00000368912 SP1P08047 785 aa13.15□□□□□ -0.31
SEMA6C-202ENST00000368912 MFGE8Q08431 387 aaPredicted RBP13.15□□□□□ -0.31
SEMA6C-202ENST00000368912 MORN2Q502X0 79 aa13.15□□□□□ -0.31
SEMA6C-202ENST00000368912 SLC18B1Q6NT16 456 aa13.15□□□□□ -0.31
SEMA6C-202ENST00000368912 LINC00114Q6XXX2 140 aa13.15□□□□□ -0.31
SEMA6C-202ENST00000368912 C11orf40Q8WZ69 217 aa13.15□□□□□ -0.31
SEMA6C-202ENST00000368912 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 OR10J4P0C629 311 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 BCL2P10415 239 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 ODF1Q14990 250 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 POM121L2Q96KW2 1035 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 M0R1X1 148 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 P2RY10O00398 339 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 CNIH1O95406 144 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 NUDT3O95989 172 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 CEBPDP49716 269 aaPredicted RBP13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 UBE2NP61088 152 aaKnown RBP13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 TRIB1Q96RU8 372 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 DOCK11Q5JSL3 2073 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 J3KRW8 73 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 FABP6P51161 128 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
SEMA6C-202ENST00000368912 ATMQ13315 3056 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 RPS4Y2Q8TD47 263 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 NPIPB7O75200 414 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 UPK3AO75631 287 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 MPIG6BO95866 241 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 ONECUT2O95948 504 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 IFNA1P01562 189 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 NBL1P41271 181 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 PSG9Q00887 426 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 RELBQ01201 579 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 EWSR1Q01844 656 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 TUSC5Q8IXB3 177 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 TMEM178AQ8NBL3 297 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 FAM222BQ8WU58 562 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 FBXL7Q9UJT9 491 aa13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
SEMA6C-202ENST00000368912 TRBV5-7A0A0A0MS05 114 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 ARPC3O15145 178 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 PPP1CBP62140 327 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 FHL1Q13642 323 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 ABCA11PQ4W5N1 156 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 FAM57BQ71RH2 274 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 PROK2Q9HC23 129 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 IL3RAP26951 378 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 SRPXP78539 464 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 RTN4RL2Q86UN3 420 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 OR5C1Q8NGR4 320 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 RTBDNQ9BSG5 229 aaPredicted RBP13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 CDC42EP3Q9UKI2 254 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 MCTS1Q9ULC4 181 aaKnown RBP13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 NXPH3O95157 252 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 FAM87AP0C7U9 286 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 SRD5A2P31213 254 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 ADMP35318 185 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 KCTD18Q6PI47 426 aaPredicted RBP13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 GPER1Q99527 375 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 CITED1Q99966 193 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 RSG1Q9BU20 258 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 SS18L2Q9UHA2 77 aa13.12□□□□□ -0.31
SEMA6C-202ENST00000368912 TRGV5A0A0B4J1U4 118 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 RHOGP84095 191 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 CEACAM16Q2WEN9 425 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 ZADH2Q8N4Q0 377 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 BORCS7Q96B45 105 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 K7EM74 188 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 PPOXP50336 477 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 ZNF684Q5T5D7 378 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 PTX4Q96A99 478 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 OXGR1Q96P68 337 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 DUXBA0A1W2PPF3 345 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 RAMP3O60896 148 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 PTGER4P35408 488 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 IL15RAQ13261 267 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 RNFT1Q5M7Z0 435 aa13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
SEMA6C-202ENST00000368912 A0A1B0GW15 77 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 G3V4G9 280 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 RPS20P60866 119 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms