RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SUPT4H1P63272 117 aaKnown RBP7.21□□□□□ -1.25
TPM3-213ENST00000368545 HOXA4Q00056 320 aaPredicted RBP7.21□□□□□ -1.25
TPM3-213ENST00000368545 AESQ08117 197 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 AWAT1Q58HT5 328 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 CENPVQ7Z7K6 275 aaPredicted RBP7.21□□□□□ -1.25
TPM3-213ENST00000368545 ZNF565Q8N9K5 539 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 IL1F10Q8WWZ1 152 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 GALNT14Q96FL9 552 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 ZNF665Q9H7R5 613 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 PLEKHF2Q9H8W4 249 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 TMEM106BQ9NUM4 274 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 KCNIP3Q9Y2W7 256 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 OR2W1Q9Y3N9 320 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 CGB1A6NKQ9 187 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 TMEM178BH3BS89 294 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 LGALS8O00214 317 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 GPR31O00270 319 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 MPPED1O15442 326 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 HSPA12AO43301 675 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 SNAPC5O75971 98 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 RPS2P15880 293 aaKnown RBP7.21□□□□□ -1.26
TPM3-213ENST00000368545 RBMXP38159 391 aaKnown RBP7.21□□□□□ -1.26
TPM3-213ENST00000368545 NKX2-5P52952 324 aaPredicted RBP7.21□□□□□ -1.26
TPM3-213ENST00000368545 H2BFSP57053 126 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 KCNJ8Q15842 424 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 FAM216AQ8WUB2 273 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 SECTM1Q8WVN6 248 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 RTN4IP1Q8WWV3 396 aaPredicted RBP7.21□□□□□ -1.26
TPM3-213ENST00000368545 NRGNQ92686 78 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 SUCNR1Q9BXA5 334 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 NAA60Q9H7X0 242 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 OR6C3Q9NZP0 311 aa7.21□□□□□ -1.26
TPM3-213ENST00000368545 DSCAML1Q8TD84 2053 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 AKAP9Q99996 3911 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 PIGBOS1A0A0B4J2F0 54 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 IGHV1-69-2A0A0G2JMI3 117 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 ODAMA1E959 279 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 SIGLEC5O15389 551 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 SPINT2O43291 252 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 NDUFB7P17568 137 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 GZMHP20718 246 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 IL2RGP31785 369 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 GLIPR1P48060 266 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 P2RX3P56373 397 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 SRPXP78539 464 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 SRSF4Q08170 494 aaKnown RBP7.2□□□□□ -1.26
TPM3-213ENST00000368545 EDDM3AQ14507 147 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 SLC9A3R2Q15599 337 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 TMEM65Q6PI78 240 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 ZNF788Q6ZQV5 615 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 CMTM1Q8IZ96 169 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 ZCCHC24Q8N2G6 241 aaKnown RBP7.2□□□□□ -1.26
TPM3-213ENST00000368545 ZNRF1Q8ND25 227 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 GAFA1Q96PS6 74 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 CHIAQ9BZP6 476 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 SLC5A7Q9GZV3 580 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 TOLLIPQ9H0E2 274 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 RAB18Q9NP72 206 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 CBLN4Q9NTU7 201 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 PIPOXQ9P0Z9 390 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 KIAA2026Q5HYC2 2103 aa7.2□□□□□ -1.26
TPM3-213ENST00000368545 PPIAL4EA0A075B759 164 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 C12orf77C9JDV5 145 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 PPIAL4DF5H284 164 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 RRHO14718 337 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 FSTL3O95633 263 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 TFF1P04155 84 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 PPIAL4FP0DN26 164 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 SRD5A1P18405 259 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 GNRHRP30968 328 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
TPM3-213ENST00000368545 HTD2P86397 168 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 CYCSP99999 105 aaKnown RBP7.19□□□□□ -1.26
TPM3-213ENST00000368545 FGL1Q08830 312 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 C2orf68Q2NKX9 166 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 HFEQ30201 348 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 LY6G6FQ5SQ64 297 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 TEX38Q6PEX7 206 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 KCTD9Q7L273 389 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 OR10V1Q8NGI7 309 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 MRGPRDQ8TDS7 321 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 CCL17Q92583 94 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 PDCD10Q9BUL8 212 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 RAB1BQ9H0U4 201 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 PPIAL4AQ9Y536 164 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 MAB21L2Q9Y586 359 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 TRAV39A0A0B4J263 110 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 IGKV1D-13A0A0B4J2D9 117 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 SMLR1H3BR10 107 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 NDUFA2O43678 99 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 CD8AP01732 235 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 HBZP02008 142 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 GYPAP02724 150 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 IGKV1-13P0DP09 117 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 EDDM3BP56851 147 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 ANKRD55Q3KP44 614 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 PHLDA2Q53GA4 152 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 FAM201AQ5SY85 155 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms