RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 FOXF2Q12947 444 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 FAM78BQ5VT40 261 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 IL22RA2Q969J5 263 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 SNX22Q96L94 193 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 GAL3ST2Q9H3Q3 398 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 TMPRSS5Q9H3S3 457 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 NAT8Q9UHE5 227 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 TECTAO75443 2155 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 MUC22E2RYF6 1773 aaPredicted RBP7.15□□□□□ -1.26
PTPRK-206ENST00000368215 TRBV6-7A0A0A0MS04 114 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 TRAV38-1A0A0B4J264 116 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 YIF1AO95070 293 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 CTRB1P17538 263 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 CD1BP29016 333 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 ERVFC1-1P60608 527 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 RPL31P62899 125 aaKnown RBP7.15□□□□□ -1.26
PTPRK-206ENST00000368215 SERF2P84101 59 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 RNFT1Q5M7Z0 435 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 CTRB2Q6GPI1 263 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 ACP7Q6ZNF0 438 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 OR4P4Q8NGL7 312 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 TPPP3Q9BW30 176 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 WNK2Q9Y3S1 2297 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 PRR14LQ5THK1 2151 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 PHOX2AO14813 284 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 NPY1RP25929 384 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 B2MP61769 119 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 RPL39P5Q59GN2 51 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 MISP3Q96FF7 219 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 TMEM56Q96MV1 263 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 ZDHHC11Q9H8X9 412 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 CALYQ9NYX4 217 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 CARHSP1Q9Y2V2 147 aaKnown RBP7.15□□□□□ -1.26
PTPRK-206ENST00000368215 TMEM56-RWDD3S4R434 201 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 DOCK11Q5JSL3 2073 aa7.15□□□□□ -1.26
PTPRK-206ENST00000368215 CDX4O14627 284 aaPredicted RBP7.15□□□□□ -1.27
PTPRK-206ENST00000368215 HPRT1P00492 218 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 OR10J4P0C629 311 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 UBE2G1P62253 170 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 DHRS7BQ6IAN0 325 aaPredicted RBP7.15□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF343Q6P1L6 599 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 ABHD12Q8N2K0 398 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 HIST1H2BAQ96A08 127 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 HARBI1Q96MB7 349 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF251Q9BRH9 671 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 LIME1Q9H400 295 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 DENND4AQ7Z401 1863 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 RHOBP62745 196 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 PNRC1Q12796 327 aaPredicted RBP7.15□□□□□ -1.27
PTPRK-206ENST00000368215 HFEQ30201 348 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 ARSJQ5FYB0 599 aaPredicted RBP7.15□□□□□ -1.27
PTPRK-206ENST00000368215 LSM10Q969L4 123 aaKnown RBP7.15□□□□□ -1.27
PTPRK-206ENST00000368215 TIMD4Q96H15 378 aa7.15□□□□□ -1.27
PTPRK-206ENST00000368215 IGHV2OR16-5A0A0B4J2B6 119 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 PGA5P0DJD9 388 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 HOXB1P14653 301 aaPredicted RBP7.14□□□□□ -1.27
PTPRK-206ENST00000368215 KIR2DS2P43631 304 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CCL20P78556 96 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 VMA21Q3ZAQ7 101 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 SPSB4Q96A44 273 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 HES4Q9HCC6 221 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 ONECUT1Q9UBC0 465 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 IGHV3-72A0A0B4J1Y9 119 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 J3QR06 171 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CT45A6P0DMU7 189 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CT45A5P0DMU8 189 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CT45A7P0DMV0 189 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 THBS3P49746 956 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CT45A1Q5HYN5 189 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CT45A3Q8NHU0 189 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CMTM2Q8TAZ6 248 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 RAB24Q969Q5 203 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 GP6Q9HCN6 339 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 SH2D2AQ9NP31 389 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 SLC25A10Q9UBX3 287 aaPredicted RBP7.14□□□□□ -1.27
PTPRK-206ENST00000368215 PTBP3O95758 552 aaKnown RBP7.14□□□□□ -1.27
PTPRK-206ENST00000368215 HSPB1P04792 205 aaKnown RBP7.14□□□□□ -1.27
PTPRK-206ENST00000368215 EGR1P18146 543 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 PSG5Q15238 335 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 ACSF3Q4G176 576 aaPredicted RBP7.14□□□□□ -1.27
PTPRK-206ENST00000368215 MIC13Q5XKP0 118 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 OR4D5Q8NGN0 318 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 ADTRPQ96IZ2 230 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 BTF3L4Q96K17 158 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 CRIM1Q9NZV1 1036 aa7.14□□□□□ -1.27
PTPRK-206ENST00000368215 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 IGHV3-21A0A0B4J1V1 117 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 TRAV20A0A0B4J274 112 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF503-AS2A6NEH8 195 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 RAB29O14966 203 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 RAMP3O60896 148 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 TRGC2P03986 189 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 MEF2BQ02080 365 aaPredicted RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 SLC35E4Q6ICL7 350 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 C20orf204Q6ZNR8 217 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 RCC1LQ96I51 464 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 TRAPPC1Q9Y5R8 145 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 IQCF6A8MYZ5 107 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms