RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ZNF93P35789 620 aaPredicted RBP10.71□□□□□ -0.69
VAMP4-202ENST00000367740 HMGN3Q15651 99 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 MRGPRG-AS1Q2M3A8 158 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 DDI2Q5TDH0 399 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 OR11H2Q8NH07 326 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 NSL1Q96IY1 281 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 S100A13Q99584 98 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 PDCD1LG2Q9BQ51 273 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 STEAP1Q9UHE8 339 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 TAGLN3Q9UI15 199 aa10.71□□□□□ -0.69
VAMP4-202ENST00000367740 GPX5O75715 221 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 TMED1Q13445 227 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 C15orf32Q32M92 178 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 RBPMS2Q6ZRY4 209 aaKnown RBP10.7□□□□□ -0.7
VAMP4-202ENST00000367740 SLC38A6Q8IZM9 456 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 IL1F10Q8WWZ1 152 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 GALNT14Q96FL9 552 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
VAMP4-202ENST00000367740 DAPL1A0PJW8 107 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 ZNF320A2RRD8 509 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 TMEM212A6NML5 194 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 T-ENOLP0DO92 83 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 MAP2K4P45985 399 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 SOX2P48431 317 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 SLC25A30Q5SVS4 291 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 XP32Q5T750 250 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 SIGIRRQ6IA17 410 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 Q6ZR54 194 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 NECAP1Q8NC96 275 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 OR5AK2Q8NH90 309 aa10.69□□□□□ -0.7
VAMP4-202ENST00000367740 SPAG8Q99932 426 aaPredicted RBP10.69□□□□□ -0.7
VAMP4-202ENST00000367740 OR2J3O76001 311 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 APOA2P02652 100 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 P0DMU3 169 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 MED22Q15528 200 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 ZDHHC13Q8IUH4 622 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 ASB9Q96DX5 294 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 RIBC2Q9H4K1 309 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 ISG20L2Q9H9L3 353 aaKnown RBP10.68□□□□□ -0.7
VAMP4-202ENST00000367740 TMEM138Q9NPI0 162 aa10.68□□□□□ -0.7
VAMP4-202ENST00000367740 EXOSC1Q9Y3B2 195 aaKnown RBP10.68□□□□□ -0.7
VAMP4-202ENST00000367740 E9PI62 339 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 MPPED1O15442 326 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 BAG2O95816 211 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 GLAP06280 429 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 RPSAP08865 295 aaKnown RBP10.67□□□□□ -0.7
VAMP4-202ENST00000367740 SCTP09683 121 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 C8orf88P0DMB2 117 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 FUT3P21217 361 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 ARL3P36405 182 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 CAPGP40121 348 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 RBMY1FQ15415 496 aaKnown RBP10.67□□□□□ -0.7
VAMP4-202ENST00000367740 OR4A47Q6IF82 309 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 Q6ZTC4 211 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 ARHGAP24Q8N264 748 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 OR5B3Q8NH48 314 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 CD300LFQ8TDQ1 290 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 SRSF12Q8WXF0 261 aaKnown RBP10.67□□□□□ -0.7
VAMP4-202ENST00000367740 RFKQ969G6 155 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 CCDC124Q96CT7 223 aaKnown RBP10.67□□□□□ -0.7
VAMP4-202ENST00000367740 NRBF2Q96F24 287 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 RNF126Q9BV68 326 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 ABRACLQ9P1F3 81 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 LRRC42Q9Y546 428 aa10.67□□□□□ -0.7
VAMP4-202ENST00000367740 TRAV10A0A0B4J240 114 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 MPTX1A8MV57 137 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 IGHV3-23P01764 117 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 AMBPP02760 352 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 GPR176Q14439 515 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 TNXAQ16473 311 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 UNQ9165/PRO28630Q6UXU0 137 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 NR2C2APQ86WQ0 139 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 HARBI1Q96MB7 349 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 ZNF184Q99676 751 aaPredicted RBP10.66□□□□□ -0.7
VAMP4-202ENST00000367740 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
VAMP4-202ENST00000367740 BANF2Q9H503 90 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 SLC35D1Q9NTN3 355 aa10.66□□□□□ -0.7
VAMP4-202ENST00000367740 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 SRRM4A7MD48 611 aaKnown RBP10.65□□□□□ -0.7
VAMP4-202ENST00000367740 TSPAN4O14817 238 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 PDCD6O75340 191 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 BDKRB2P30411 391 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 PPP3R1P63098 170 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 ZNF124Q15973 351 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 ZNF585BQ52M93 769 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 CLEC19AQ6UXS0 136 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 C19orf35Q6ZS72 473 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 SVOPQ8N4V2 548 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms