RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ETHE1O95571 254 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 HTN1P15515 57 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 AZU1P20160 251 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 PRDX4Q13162 271 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 C19orf54Q5BKX5 351 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 PARP11Q9NR21 331 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 CMC2Q9NRP2 79 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 RBBP6Q7Z6E9 1792 aaKnown RBP7.52□□□□□ -1.21
SYNE1-206ENST00000367253 TRAV8-1A0A0A6YYK1 113 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 TCRBV5S1A1TA0A578 114 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 NPIPB9F8W1W9 429 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ZNF205O95201 554 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 MPC2O95563 127 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 HPXP02790 462 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ATP6V0CP27449 155 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 TMEM33P57088 247 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 YBX1P67809 324 aaKnown RBP7.52□□□□□ -1.21
SYNE1-206ENST00000367253 LY6EQ16553 131 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 KHDC3LQ587J8 217 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 PAQR9Q6ZVX9 377 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 ARIH2OSQ8N7S6 290 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 NOXO1Q8NFA2 376 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 RASL10BQ96S79 203 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 EMC6Q9BV81 110 aa7.52□□□□□ -1.21
SYNE1-206ENST00000367253 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-206ENST00000367253 COA3Q9Y2R0 106 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-206ENST00000367253 IGHV3-15A0A0B4J1V0 119 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 TRAV1-2A0A0B4J238 106 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 A0A0U1RQV1 116 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 MFNGO00587 321 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 FGF17O60258 216 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 NGFP01138 241 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 NSUN5P1Q3KNT7 163 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 PRSS54Q6PEW0 395 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 C9orf62Q8N4C0 152 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 SYT8Q8NBV8 401 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 CSTL1Q9H114 145 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 CISD3P0C7P0 127 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 PGA4P0DJD7 388 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 PGA5P0DJD9 388 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 DUTP33316 252 aaKnown RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 HIST1H1AQ02539 215 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 OR5C1Q8NGR4 320 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 SLAMF6Q96DU3 332 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 PGPA6NDG6 321 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 H3BQ15 152 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 APOMO95445 188 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 SLC2A10O95528 541 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 ORM2P19652 201 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 UCP3P55916 312 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 WNT3P56703 355 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 HSD52Q0P140 79 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 ADAD2Q8NCV1 583 aaKnown RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 PP6455Q8WZ26 134 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 ACY3Q96HD9 319 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 C4orf45Q96LM5 186 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 MANBALQ9NQG1 85 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 NTNG1Q9Y2I2 539 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 J3QR06 171 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 ERGP11308 486 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 HTN3P15516 51 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 CEACAM8P31997 349 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 UBE2L3P68036 154 aaKnown RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 SLC38A11Q08AI6 406 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 CTF1Q16619 201 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 FAM71E1Q6IPT2 247 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 OLIG3Q7RTU3 272 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 OR6X1Q8NH79 312 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 WBP1Q96G27 269 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 WDFY2Q96P53 400 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 MARVELD1Q9BSK0 173 aa7.51□□□□□ -1.21
SYNE1-206ENST00000367253 SLIRPQ9GZT3 109 aaKnown RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 SNRNP200O75643 2136 aaKnown RBP7.51□□□□□ -1.21
SYNE1-206ENST00000367253 PTPRFP10586 1907 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 TRAV30A0A087WSZ9 112 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 A0A1W2PR80 420 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 MYOD1P15172 320 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 RPL31P62899 125 aaKnown RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 MEIG1Q5JSS6 88 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 RNF166Q96A37 237 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 PGLYRP3Q96LB9 341 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 NAA60Q9H7X0 242 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 SLC6A13Q9NSD5 602 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 TMSB15BA0A087X1C1 80 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 IGHV1-69-2A0A0G2JMI3 117 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 DHRS2Q13268 280 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 IL13RA2Q14627 380 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 ACSF3Q4G176 576 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 COX20Q5RI15 118 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 DOCK7Q96N67 2140 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 PRSS21Q9Y6M0 314 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 EP400Q96L91 3159 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 INHBBP09529 407 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 MRPS11P82912 194 aaKnown RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 EGR3Q06889 387 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms