RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 CT45A6P0DMU7 189 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 CT45A5P0DMU8 189 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 CT45A7P0DMV0 189 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 AP3S2P59780 193 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 FAM53AQ6NSI3 398 aaPredicted RBP12.33□□□□□ -0.44
PRKN-203ENST00000366894 FAM131AQ6UXB0 335 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 ZNF66Q6ZN08 573 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 Q8N2B8 174 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 POC5Q8NA72 575 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 CYYR1Q96J86 154 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
PRKN-203ENST00000366894 MIXL1Q9H2W2 232 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 LIN7CQ9NUP9 197 aaKnown RBP12.33□□□□□ -0.44
PRKN-203ENST00000366894 SDHAF2Q9NX18 166 aa12.33□□□□□ -0.44
PRKN-203ENST00000366894 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 PMP2P02689 132 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 PTHLHP12272 177 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 HLA-DMAP28067 261 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 ECI1P42126 302 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 KIR2DS2P43631 304 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 SRSF4Q08170 494 aaKnown RBP12.32□□□□□ -0.44
PRKN-203ENST00000366894 CATR1Q13166 79 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 MEF2DQ14814 521 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
PRKN-203ENST00000366894 FOXRED2Q8IWF2 684 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 TMEM229BQ8NBD8 167 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 CD300LFQ8TDQ1 290 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 WFDC12Q8WWY7 111 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 DEDD2Q8WXF8 326 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 CMYA5Q8N3K9 4069 aa12.32□□□□□ -0.44
PRKN-203ENST00000366894 CHST1O43916 411 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 HRH1P35367 487 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 FAUP35544 74 aaKnown RBP12.31□□□□□ -0.44
PRKN-203ENST00000366894 VDAC2P45880 294 aaPredicted RBP12.31□□□□□ -0.44
PRKN-203ENST00000366894 RFX2P48378 723 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 RPS16P62249 146 aaKnown RBP12.31□□□□□ -0.44
PRKN-203ENST00000366894 PLGLAQ15195 96 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 MMDQ15546 238 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 ABCA11PQ4W5N1 156 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 LIN54Q6MZP7 749 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 LINC00299Q6ZSB3 139 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 Q8N6K4 173 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 TCTEX1D1Q8N7M0 179 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 NPBQ8NG41 125 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 SMIM4Q8WVI0 70 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 SECTM1Q8WVN6 248 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 SNAPC3Q92966 411 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 ZNF2Q9BSG1 426 aaPredicted RBP12.31□□□□□ -0.44
PRKN-203ENST00000366894 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 SLC35D1Q9NTN3 355 aa12.31□□□□□ -0.44
PRKN-203ENST00000366894 RBMX2Q9Y388 322 aaKnown RBP12.31□□□□□ -0.44
PRKN-203ENST00000366894 H0YJW9 148 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 NBR2O15453 112 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 GSTZ1O43708 216 aaPredicted RBP12.3□□□□□ -0.44
PRKN-203ENST00000366894 CREBL2O60519 120 aaPredicted RBP12.3□□□□□ -0.44
PRKN-203ENST00000366894 SPDEFO95238 335 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 AADACP22760 399 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 PROK1P58294 105 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 BLCAPP62952 87 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 SLC35B1P78383 322 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
PRKN-203ENST00000366894 C5orf56Q8N8D9 126 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 OR52I2Q8NH67 350 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 OSR1Q8TAX0 266 aaPredicted RBP12.3□□□□□ -0.44
PRKN-203ENST00000366894 SCGB3A2Q96PL1 93 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
PRKN-203ENST00000366894 KLK11Q9UBX7 282 aa12.3□□□□□ -0.44
PRKN-203ENST00000366894 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 J3QRK9 145 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 FCER2P06734 321 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
PRKN-203ENST00000366894 ETV6P41212 452 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 UCP3P55916 312 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 FXYD4P59646 89 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 PYDC2Q56P42 97 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 DRAXINQ8NBI3 349 aaPredicted RBP12.29□□□□□ -0.44
PRKN-203ENST00000366894 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 CHPT1Q8WUD6 406 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 MOB3AQ96BX8 217 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 VWFP04275 2813 aa12.29□□□□□ -0.44
PRKN-203ENST00000366894 SHOXO15266 292 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 RAB3DO95716 219 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 HRASP01112 189 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 AKAIN1P0CW23 69 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 INPP1P49441 399 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 ZNF45Q02386 682 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
PRKN-203ENST00000366894 VMA21Q3ZAQ7 101 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 STEAP1BQ6NZ63 245 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
PRKN-203ENST00000366894 SLC38A6Q8IZM9 456 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms