RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TMEM95Q3KNT9 176 aa13.83□□□□□ -0.19
COL18A1-203ENST00000359759 QTRT1Q9BXR0 403 aaKnown RBP13.83□□□□□ -0.19
COL18A1-203ENST00000359759 hCG_38984A0A1B0GV85 526 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 CFDP00746 253 aaPredicted RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 GPR6P46095 362 aaPredicted RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 ZNF721Q8TF20 911 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 GMPPAQ96IJ6 420 aaPredicted RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 CHRNA10Q9GZZ6 450 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 TMEM222Q9H0R3 208 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 TLNRD1Q9H1K6 362 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 NPFFO15130 113 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 FAM106CPP0CH98 169 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 P2RY4P51582 365 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 EGR1P18146 543 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 PEBP1P30086 187 aaKnown RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 RND3P61587 244 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 RELQ04864 619 aaPredicted RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 BEND2Q8NDZ0 799 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 GGACTQ9BVM4 153 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 PGPEP1Q9NXJ5 209 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 ZNFX1Q9P2E3 1918 aaKnown RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 UCP2P55851 309 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 DMRTA1Q5VZB9 504 aa13.83□□□□□ -0.2
COL18A1-203ENST00000359759 ZNF430Q9H8G1 570 aaPredicted RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 CISD1Q9NZ45 108 aaKnown RBP13.83□□□□□ -0.2
COL18A1-203ENST00000359759 MUC21A0A0G2JKD1 596 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 MUC21A0A140T8X8 626 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 A0A1W2PPV9 198 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 RECKO95980 971 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 MUC21Q5SSG8 566 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 ERVH48-1M5A8F1 160 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 FHITP49789 147 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 SUMO2P61956 95 aaKnown RBP13.82□□□□□ -0.2
COL18A1-203ENST00000359759 HIST1H1AQ02539 215 aaPredicted RBP13.82□□□□□ -0.2
COL18A1-203ENST00000359759 SFRP2Q96HF1 295 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 C14orf144Q96I85 54 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 SPAG8Q99932 426 aaPredicted RBP13.82□□□□□ -0.2
COL18A1-203ENST00000359759 IGHV3OR16-10A0A075B7F0 116 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 WNT9BO14905 357 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 FGF12P61328 243 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 RPL8P62917 257 aaKnown RBP13.82□□□□□ -0.2
COL18A1-203ENST00000359759 APCDD1LQ8NCL9 501 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 ITLN1Q8WWA0 313 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 IGHV3-35A0A0C4DH35 117 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 MOSPD3O75425 235 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 THY1P04216 161 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 HOXD4P09016 255 aaPredicted RBP13.82□□□□□ -0.2
COL18A1-203ENST00000359759 SNAI3Q3KNW1 292 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 TMEM170BQ5T4T1 132 aa13.82□□□□□ -0.2
COL18A1-203ENST00000359759 PSG9Q00887 426 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 FGFRL1Q8N441 504 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 CXorf51AA0A1B0GTR3 108 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 A0A1W2PS18 150 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 PATE3B3GLJ2 98 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 C8orf82Q6P1X6 216 aaPredicted RBP13.81□□□□□ -0.2
COL18A1-203ENST00000359759 PCM1Q15154 2024 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 TRBV20OR9-2A0A075B6H5 130 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 IL9P15248 144 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
COL18A1-203ENST00000359759 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-203ENST00000359759 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 CBLN1P23435 193 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 FCARP24071 287 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 GOLT1AQ6ZVE7 132 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 SMDT1Q9H4I9 107 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 A1L4Q6 167 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 C9JCJ5 164 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 SPINT1O43278 529 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 HLA-DQB1P01920 261 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 C1orf185Q5T7R7 199 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 CALYQ9NYX4 217 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 CA11O75493 328 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 VAX1Q5SQQ9 334 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 ABHD12Q8N2K0 398 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 GALNT14Q96FL9 552 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
COL18A1-203ENST00000359759 TYMSP04818 313 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 LINC00518Q8N0U6 118 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 SPAARA0A1B0GVQ0 90 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 PTP4A3O75365 173 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 S1PR2O95136 353 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 AMELYQ99218 206 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 PRRC2BQ5JSZ5 2229 aaKnown RBP13.8□□□□□ -0.2
COL18A1-203ENST00000359759 ISG15P05161 165 aa13.8□□□□□ -0.2
COL18A1-203ENST00000359759 C7orf66A4D0T2 115 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 ASCC3Q8N3C0 2202 aaKnown RBP13.79□□□□□ -0.2
COL18A1-203ENST00000359759 IGHV3OR16-13A0A075B7E8 117 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 IGHV3-74A0A0B4J1X5 117 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 CDX1P47902 265 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-203ENST00000359759 LCN2P80188 198 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 FAM169BQ8N8A8 192 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 COPS9Q8WXC6 57 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 SF3B6Q9Y3B4 125 aaKnown RBP13.79□□□□□ -0.2
COL18A1-203ENST00000359759 RAX2Q96IS3 184 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 CCL27Q9Y4X3 112 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 FOXA3P55318 350 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-203ENST00000359759 IDI2-AS1Q9NZ38 188 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms