RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 PCGF1Q9BSM1 259 aa20.2■□□□□ 0.82
SHARPIN-201ENST00000359551 AMMECR1Q9Y4X0 333 aaPredicted RBP20.2■□□□□ 0.82
SHARPIN-201ENST00000359551 SERPINE2P07093 398 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 SELENOHQ8IZQ5 122 aaKnown RBP20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 ZNF436Q9C0F3 470 aaPredicted RBP20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 LY6LH3BQJ8 138 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 ADAP1O75689 374 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 OR2A4O95047 310 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 CT45A6P0DMU7 189 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 CT45A5P0DMU8 189 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 CT45A7P0DMV0 189 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 RPA2P15927 270 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 GATA3P23771 443 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 H2BFSP57053 126 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 CD83Q01151 205 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 CD300CQ08708 224 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 TMEM268Q5VZI3 342 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 SPAG16Q8N0X2 631 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 ZNF383Q8NA42 475 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 RBPMSQ93062 196 aaKnown RBP20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 OR2A7Q96R45 310 aa20.19■□□□□ 0.82
SHARPIN-201ENST00000359551 PIGBOS1A0A0B4J2F0 54 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 DUXBA0A1W2PPF3 345 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 A8MV72 311 aaPredicted RBP20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 RBFOX2O43251 390 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 DCAF12L2Q5VW00 463 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 ZNF695Q8IW36 515 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 SLC35G3Q8N808 338 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 WFDC11Q8NEX6 87 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 CD300LFQ8TDQ1 290 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 RANGRFQ9HD47 186 aaPredicted RBP20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 PRELID3BQ9Y3B1 194 aa20.18■□□□□ 0.82
SHARPIN-201ENST00000359551 CCSO14618 274 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 RAMP3O60896 148 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 IGKV1-39P01597 117 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 IGKV1D-39P04432 117 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 ARG1P05089 322 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 KIR2DS2P43631 304 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 SRSF4Q08170 494 aaKnown RBP20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 DIAPH2-AS1Q14236 149 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 LYZL2Q7Z4W2 148 aa20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 MRPL20Q9BYC9 149 aaKnown RBP20.17■□□□□ 0.82
SHARPIN-201ENST00000359551 SIX6O95475 246 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 HOXB5P09067 269 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 UBE2E1P51965 193 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 TMEM249Q2WGJ8 235 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 ASB13Q8WXK3 278 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 HIF1ANQ9NWT6 349 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 TMED3Q9Y3Q3 217 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 GIPP09681 153 aaPredicted RBP20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 IGHV4-31P0DP07 118 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 HTR1DP28221 377 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 LPAR6P43657 344 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 OR2B11Q5JQS5 317 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 LDLRAD2Q5SZI1 272 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 GGNBP1Q5YKI7 109 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 TGIF2LXQ8IUE1 241 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 TCTE3Q8IZS6 198 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 MAPK1IP1LQ8NDC0 245 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 OR5AN1Q8NGI8 311 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 FYTTD1Q96QD9 318 aaKnown RBP20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 NABP2Q9BQ15 211 aa20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 MAP1AP78559 2803 aaPredicted RBP20.16■□□□□ 0.82
SHARPIN-201ENST00000359551 TAGLNQ01995 201 aaKnown RBP20.15■□□□□ 0.82
SHARPIN-201ENST00000359551 ZNF816Q0VGE8 651 aaPredicted RBP20.15■□□□□ 0.82
SHARPIN-201ENST00000359551 DPM3Q9P2X0 92 aa20.15■□□□□ 0.82
SHARPIN-201ENST00000359551 LEUTXA8MZ59 168 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 TXNL1O43396 289 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 FCGR3BO75015 233 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 IFNA21P01568 189 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 VDAC1P21796 283 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 REG1BP48304 166 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 GZMKP49863 264 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 GSG1LQ6UXU4 331 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 LHX4Q969G2 390 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 PPP1R14BQ96C90 147 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 PLEKHA2Q9HB19 425 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 AUP1Q9Y679 476 aa20.14■□□□□ 0.81
SHARPIN-201ENST00000359551 MPTX1A8MV57 137 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 GAPDHP04406 335 aaKnown RBP20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 NMSQ5H8A3 153 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 TPTE2P1Q5T6R2 138 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 MINOS1Q5TGZ0 78 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 MINOS1-NBL1R4GNA1 71 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 SETXQ7Z333 2677 aaKnown RBP20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 H0YJW9 148 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 S1PR2O95136 353 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 HPRT1P00492 218 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 CEACAM3P40198 252 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 RAP2BP61225 183 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 PDZD9Q8IXQ8 264 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 OR4S2Q8NH73 311 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 LSM10Q969L4 123 aaKnown RBP20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 RPEQ96AT9 228 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 WDR89Q96FK6 387 aaPredicted RBP20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 OR10C1Q96KK4 312 aa20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 TBL2Q9Y4P3 447 aaKnown RBP20.13■□□□□ 0.81
SHARPIN-201ENST00000359551 CCDC168Q8NDH2 2452 aa20.12■□□□□ 0.81
SHARPIN-201ENST00000359551 CREBBPQ92793 2442 aa20.12■□□□□ 0.81
SHARPIN-201ENST00000359551 DHRS7BQ6IAN0 325 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms