RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ZDHHC11Q9H8X9 412 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 WASHC3Q9Y3C0 194 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 OR51B2Q9Y5P1 312 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 B3GALT1Q9Y5Z6 326 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 TRAPPC2LH3BP13 241 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 ARPC3O15145 178 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 HPNP05981 417 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 IGLL1P15814 213 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 AMY2BP19961 511 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 HERV-K104P63124 156 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 MRPS34P82930 218 aaKnown RBP7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 TSPO2Q5TGU0 170 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 BAGE3Q86Y29 109 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 BAGE2Q86Y30 109 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 ZNF524Q96C55 264 aa7.92□□□□□ -1.14
SMARCAL1-202ENST00000358207 DUXBA0A1W2PPF3 345 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 NUDT3O95989 172 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 GYPAP02724 150 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 TTRP02766 147 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 CBLN1P23435 193 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 CEACAM21Q3KPI0 293 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 KCNIP4Q6PIL6 250 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 ST6GALNAC6Q969X2 333 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 VSTM2LQ96N03 204 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 FOXN4Q96NZ1 517 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 RELNP78509 3460 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 EPG5Q9HCE0 2579 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 TNRC6AQ8NDV7 1962 aaKnown RBP7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 IGKV1D-8A0A087WSZ0 117 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 J3QKU1 62 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 P2RY10O00398 339 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 HLA-HP01893 362 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 FRMD6-AS1P0C7T7 363 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 PSG4Q00888 419 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 TMEM187Q14656 261 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 EIPR1Q53HC9 387 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 C1orf140Q5VVS0 124 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 COLCA1Q6ZS62 124 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 MARCH3Q86UD3 253 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 TMEM252Q8N6L7 170 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 BCORP1Q8N888 145 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 SPSB1Q96BD6 273 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 GNPNAT1Q96EK6 184 aaPredicted RBP7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 ATRXP46100 2492 aa7.91□□□□□ -1.14
SMARCAL1-202ENST00000358207 ZNF205O95201 554 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 OPRM1P35372 400 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 SPIN3Q5JUX0 258 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 CCDC144NLQ6NUI1 221 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 OR4A5Q8NH83 315 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 PLEKHF2Q9H8W4 249 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 SS18L2Q9UHA2 77 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 A0A1W2PP11 408 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 SHISA8B8ZZ34 492 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 TSPAN13O95857 204 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 OR10J4P0C629 311 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 SNU13P55769 128 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 CSNK2A1P68400 391 aaPredicted RBP7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 HIST3H3Q16695 136 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 SULF2Q8IWU5 870 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 CSNK2A3Q8NEV1 391 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 DERL1Q9BUN8 251 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 PECRQ9BY49 303 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 CHRNA10Q9GZZ6 450 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 LOXL2Q9Y4K0 774 aa7.9□□□□□ -1.14
SMARCAL1-202ENST00000358207 DOCK10Q96BY6 2186 aa7.9□□□□□ -1.15
SMARCAL1-202ENST00000358207 LOC101059948A0A1B0GTJ6 334 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 MEGF11A6BM72 1044 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 H0YIG0 161 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 TMEM50AO95807 157 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 LIPFP07098 398 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 HIST1H1DP16402 221 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 AMTP48728 403 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 DNASE1L1P49184 302 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 IGSF10Q6WRI0 2623 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 MBD3L1Q8WWY6 194 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 PCNX1Q96RV3 2341 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 LIME1Q9H400 295 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 PTRH2Q9Y3E5 179 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 COL12A1Q99715 3063 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 TMEM14DPA8MWL7 114 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 J3QR06 171 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 PMCHP20382 165 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 TIMP3P35625 211 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 PPP1CBP62140 327 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 BRICD5Q6PL45 260 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 KCNG3Q8TAE7 436 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 ARHGAP5-AS1Q96IT6 56 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 C18orf12Q96KH6 178 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 RCHY1Q96PM5 261 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 CHRDL1Q9BU40 450 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 GNB4Q9HAV0 340 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 HIF1ANQ9NWT6 349 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 PPP1R3CQ9UQK1 317 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 NKX2-6A6NCS4 301 aa7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 SLC33A1O00400 549 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-202ENST00000358207 ZNF737O75373 536 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms