RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 BVESQ8NE79 360 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
CCNE1-202ENST00000357943 NAP1L6A6NFF2 107 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 H3BUX3 64 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 PGAM2P15259 253 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 ARHGDIBP52566 201 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 RPL30P62888 115 aaKnown RBP11.94□□□□□ -0.5
CCNE1-202ENST00000357943 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
CCNE1-202ENST00000357943 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 ZNF383Q8NA42 475 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 AKR1E2Q96JD6 320 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 ESM1Q9NQ30 184 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 TNFRSF19Q9NS68 423 aa11.94□□□□□ -0.5
CCNE1-202ENST00000357943 H0YJW9 148 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 GPR31O00270 319 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 BRS3P32247 399 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 DYNLT3P51808 116 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 AANATQ16613 207 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 LPCAT3Q6P1A2 487 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 LURAP1LQ8IV03 231 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 OR5AN1Q8NGI8 311 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 ZNF418Q8TF45 676 aaPredicted RBP11.93□□□□□ -0.5
CCNE1-202ENST00000357943 SSMEM1Q8WWF3 244 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 CAPSLQ8WWF8 208 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 NF1P21359 2839 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 FAM90A9PA6NNJ1 464 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 IGKV1D-33P01593 117 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 IGKV1-33P01594 117 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
CCNE1-202ENST00000357943 ECI1P42126 302 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 BCAP31P51572 246 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 LY6EQ16553 131 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 PLET1Q6UQ28 207 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 CMTM1Q8IZ96 169 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 DDB2Q92466 427 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 RTBDNQ9BSG5 229 aaPredicted RBP11.93□□□□□ -0.5
CCNE1-202ENST00000357943 DPAGT1Q9H3H5 408 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 VSIG4Q9Y279 399 aa11.93□□□□□ -0.5
CCNE1-202ENST00000357943 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 PGLYRP1O75594 196 aaPredicted RBP11.92□□□□□ -0.5
CCNE1-202ENST00000357943 VENTXO95231 258 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 RLN1P04808 185 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 CD1BP29016 333 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 THBS3P49746 956 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 HILS1P60008 231 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 CBX3Q13185 183 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 RBMS2Q15434 407 aaKnown RBP11.92□□□□□ -0.5
CCNE1-202ENST00000357943 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
CCNE1-202ENST00000357943 SLC9A3R2Q15599 337 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 ZFAND1Q8TCF1 268 aa11.92□□□□□ -0.5
CCNE1-202ENST00000357943 HSD17B10Q99714 261 aaKnown RBP11.92□□□□□ -0.5
CCNE1-202ENST00000357943 IGKV1-16P04430 117 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 CTSDP07339 412 aaPredicted RBP11.91□□□□□ -0.5
CCNE1-202ENST00000357943 FAM106CPP0CH98 169 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 PIGPP57054 158 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 BRWD1-AS2P59051 145 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 HES1Q14469 280 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 HNF4GQ14541 408 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 TMEM219Q86XT9 240 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 TCTEX1D2Q8WW35 142 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
CCNE1-202ENST00000357943 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
CCNE1-202ENST00000357943 MARVELD1Q9BSK0 173 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 TCF19Q9Y242 345 aa11.91□□□□□ -0.5
CCNE1-202ENST00000357943 H7C2Y5 167 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 NDUFB6O95139 128 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 TCRBP04435 133 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 MC5RP33032 325 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 EBI3Q14213 229 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 ABCA11PQ4W5N1 156 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 THNSL2Q86YJ6 484 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 OR5R1Q8NH85 324 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 EAF1Q96JC9 268 aaPredicted RBP11.9□□□□□ -0.5
CCNE1-202ENST00000357943 RITA1Q96K30 269 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 CHIAQ9BZP6 476 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 COPZ2Q9P299 210 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 WASHC3Q9Y3C0 194 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 POMT1Q9Y6A1 747 aa11.9□□□□□ -0.5
CCNE1-202ENST00000357943 SETD2Q9BYW2 2564 aaPredicted RBP11.9□□□□□ -0.5
CCNE1-202ENST00000357943 A6NDX4 124 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 TCF21O43680 179 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 FCGR3BO75015 233 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 APOA2P02652 100 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms