RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TUSC2O75896 110 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 APOA2P02652 100 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 MDKP21741 143 aaPredicted RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 VDAC2P45880 294 aaPredicted RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 OR3A3P47888 321 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 THBS3P49746 956 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 RAB13P51153 203 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 LUMP51884 338 aaPredicted RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 HES1Q14469 280 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 RPL39P5Q59GN2 51 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 LAX1Q8IWV1 398 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 GVQW1Q8N7I0 195 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 C5orf56Q8N8D9 126 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 OR2T6Q8NHC8 308 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ADTRPQ96IZ2 230 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 AGMATQ9BSE5 352 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF747Q9BV97 191 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 SLIRPQ9GZT3 109 aaKnown RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 WASHC3Q9Y3C0 194 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ANK2Q01484 3957 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 NF1P21359 2839 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 IGHV3-72A0A0B4J1Y9 119 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 H0YJW9 148 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 M0R1X1 148 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 CTDSPLO15194 276 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 RGS5O15539 181 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 SPDEFO95238 335 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 HLA-DQB1P01920 261 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 RRASP10301 218 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 PTHLHP12272 177 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 TBPP20226 339 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 PROK1P58294 105 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 LINC00310P59036 64 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ACTBP60709 375 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 HERV-K104P61576 105 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 SSBP1Q04837 148 aaKnown RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 CBX3Q13185 183 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 PYHIN1Q6K0P9 492 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 FAM131AQ6UXB0 335 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 PDPNQ86YL7 162 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 SNX29P2Q8IUI4 249 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF645Q8N7E2 425 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 OR5AP2Q8NGF4 316 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 OR5H2Q8NGV7 314 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 MCFD2Q8NI22 146 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 LINC01006Q8NI28 216 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 C5orf30Q96GV9 206 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ABHD14BQ96IU4 210 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 RNF5Q99942 180 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 SDHAF2Q9NX18 166 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 PRR13Q9NZ81 148 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF107Q9UII5 783 aaPredicted RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 OR2W1Q9Y3N9 320 aa3.16□□□□□ -1.9
CNOT4-202ENST00000356162 RBM7Q9Y580 266 aaKnown RBP3.16□□□□□ -1.9
CNOT4-202ENST00000356162 MEIS3P1A6NDR6 274 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 GABARAPH6UMI1 98 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 NDUFA3O95167 84 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 PPYP01298 95 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 OR8U9P0C7N5 309 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 CT45A6P0DMU7 189 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 CT45A5P0DMU8 189 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 CT45A7P0DMV0 189 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 OR5H8P0DN80 308 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 AADACP22760 399 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 NFYAP23511 347 aaPredicted RBP3.15□□□□□ -1.9
CNOT4-202ENST00000356162 CD24P25063 80 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 MC5RP33032 325 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 KIR2DS2P43631 304 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 C3orf56Q8N813 242 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 Q8N9W7 124 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 ZBTB34Q8NCN2 500 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 OR5AN1Q8NGI8 311 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 OR8U1Q8NH10 309 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 SMIM4Q8WVI0 70 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 BORCS5Q969J3 196 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 TSNAXQ99598 290 aaKnown RBP3.15□□□□□ -1.9
CNOT4-202ENST00000356162 C6orf62Q9GZU0 229 aaPredicted RBP3.15□□□□□ -1.9
CNOT4-202ENST00000356162 FXYD6Q9H0Q3 95 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 MMP27Q9H306 513 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 SLC35D1Q9NTN3 355 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 LIN7CQ9NUP9 197 aaKnown RBP3.15□□□□□ -1.9
CNOT4-202ENST00000356162 EHFQ9NZC4 300 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 ZNF580Q9UK33 172 aa3.15□□□□□ -1.9
CNOT4-202ENST00000356162 MRPS7Q9Y2R9 242 aaKnown RBP3.15□□□□□ -1.9
CNOT4-202ENST00000356162 RBMX2Q9Y388 322 aaKnown RBP3.15□□□□□ -1.9
CNOT4-202ENST00000356162 IGKV1D-13A0A0B4J2D9 117 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 CTDSP2O14595 271 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 SHOXO15266 292 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 NBR2O15453 112 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 KCNAB3O43448 404 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 GSTZ1O43708 216 aaPredicted RBP3.15□□□□□ -1.91
CNOT4-202ENST00000356162 AMY1AP04745 511 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 AMY2AP04746 511 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 IGKV1-13P0DP09 117 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 PTBP1P26599 531 aaKnown RBP eCLIP3.15□□□□□ -1.91
CNOT4-202ENST00000356162 FCGR2CP31995 323 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 EIF4EBP1Q13541 118 aaPredicted RBP3.15□□□□□ -1.91
CNOT4-202ENST00000356162 DYRK1AQ13627 763 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 MMDQ15546 238 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 RTL8BQ17RB0 113 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms