RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 CCL8P80075 99 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 RTP5Q14D33 572 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 SSX2Q16385 188 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 PCSK4Q6UW60 755 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 H1FOOQ8IZA3 346 aaPredicted RBP10.25□□□□□ -0.77
SIRPA-201ENST00000356025 IER2Q9BTL4 223 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 IGKV3D-15A0A087WSY6 115 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 IGKV1-5P01602 117 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 IGHV3-48P01763 117 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 LYL1P12980 280 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 REG1BP48304 166 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 SPSB4Q96A44 273 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 TMEM56Q96MV1 263 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 TMEM56-RWDD3S4R434 201 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 H7BYZ3 331 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 ID3Q02535 119 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 NCR3LG1Q68D85 454 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 COMMD1Q8N668 190 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 KIAA1456Q9P272 454 aa10.25□□□□□ -0.77
SIRPA-201ENST00000356025 NCKAP5O14513 1909 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 IRF2P14316 349 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 ERVFRD-1P60508 538 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 RAB4BP61018 213 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 TFF3Q07654 80 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 GCSAMLQ5JQS6 135 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 ABHD12Q8N2K0 398 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 R3HDM4Q96D70 268 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 PRDX2P32119 198 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 NMSQ5H8A3 153 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 ASCL4Q6XD76 172 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 MRPL41Q8IXM3 137 aaKnown RBP10.24□□□□□ -0.77
SIRPA-201ENST00000356025 Q8IYB0 196 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 PPP1R35Q8TAP8 253 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
SIRPA-201ENST00000356025 OR2V2Q96R30 315 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 ODAMA1E959 279 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 BTBD17A6NE02 478 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 COLCA1Q6ZS62 124 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 C1orf87Q8N0U7 546 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 RPRMLQ8N4K4 120 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 SNIP1Q8TAD8 396 aaKnown RBP10.24□□□□□ -0.77
SIRPA-201ENST00000356025 PINX1Q96BK5 328 aaKnown RBP10.24□□□□□ -0.77
SIRPA-201ENST00000356025 LURAP1Q96LR2 239 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 S1PR3Q99500 378 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 CXXC4Q9H2H0 198 aa10.24□□□□□ -0.77
SIRPA-201ENST00000356025 ANKRD11Q6UB99 2663 aaPredicted RBP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 PLXNB1O43157 2135 aa10.23□□□□□ -0.77
SIRPA-201ENST00000356025 ENSAO43768 121 aaKnown RBP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 SRP19P09132 144 aaKnown RBP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 PACRGQ96M98 296 aaPredicted RBP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 CLDN14O95500 239 aa10.23□□□□□ -0.77
SIRPA-201ENST00000356025 HSPB1P04792 205 aaKnown RBP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 KHDC3LQ587J8 217 aa10.23□□□□□ -0.77
SIRPA-201ENST00000356025 HIPK2Q9H2X6 1198 aa10.23□□□□□ -0.77
SIRPA-201ENST00000356025 RPH3ALQ9UNE2 315 aa10.23□□□□□ -0.77
SIRPA-201ENST00000356025 CDX1P47902 265 aaPredicted RBP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 ITLN1Q8WWA0 313 aa10.23□□□□□ -0.77
SIRPA-201ENST00000356025 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
SIRPA-201ENST00000356025 DVL1O14640 695 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 IGKV1-39P01597 117 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 IGKV1D-39P04432 117 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 SOD3P08294 240 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 TNFRSF9Q07011 255 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 BHLHA15Q7RTS1 189 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 LRTM2Q8N967 370 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 OR8G5Q8NG78 346 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 OR13D1Q8NGV5 346 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 CCL17Q92583 94 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 CCL13Q99616 98 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 SERTAD4Q9NUC0 356 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A10PA6NDY2 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A18PA6NE21 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A16PA6NEW6 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 OOEPA6NGQ2 149 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A20PA6NIJ5 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A8PA6NJQ4 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A7PA6NKC0 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A22PA8MWA6 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A12PA8MX19 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A5PA8MXJ8 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A23PA8MXZ1 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 SCGB1D1O95968 90 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 CYB5R3P00387 301 aaPredicted RBP10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A15PP0C7V4 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A13PP0C7W8 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A14PP0C7W9 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM90A24PP0C7X0 464 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 BCL2P10415 239 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 COX5BP10606 129 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 COX5AP20674 150 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 FAM27E3Q08E93 113 aa10.22□□□□□ -0.77
SIRPA-201ENST00000356025 ICAM4Q14773 271 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms