RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TFAP2AP05549 437 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 CRYGBP07316 175 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 MC5RP33032 325 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 TGFBR1P36897 503 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 DEFA5Q01523 94 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF660Q6AZW8 331 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF773Q6PK81 442 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 LGALS14Q8TCE9 139 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 NUDCD2Q8WVJ2 157 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 PRR25Q96S07 402 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 DAPK2Q9UIK4 370 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF221Q9UK13 617 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 LINC00473A8K010 186 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 J3QRK9 145 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 GADD45AP24522 165 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 SDC2P34741 201 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 SLURP1P55000 103 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 RPS16P62249 146 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 MXD1Q05195 221 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 PLGLAQ15195 96 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 CDNFQ49AH0 187 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 PPP1R27Q86WC6 154 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 SLC25A38Q96DW6 304 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 CHCHD6Q9BRQ6 235 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 SLC35D1Q9NTN3 355 aa12.94□□□□□ -0.34
PDLIM7-201ENST00000355572 IGHV4OR15-8A0A075B7B6 117 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 A0A087WW49 117 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 TMEM235A6NFC5 223 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 RBBP9O75884 186 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 OR5H8P0DN80 308 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 RUNX1Q01196 453 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 ARFRP1Q13795 201 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 SFXN4Q6P4A7 337 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 PDPNQ86YL7 162 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 BVESQ8NE79 360 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 OR5M8Q8NGP6 311 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 OR1N2Q8NGR9 330 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 ABHD5Q8WTS1 349 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 DDB2Q92466 427 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 MS4A10Q96PG2 267 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 FOXA2Q9Y261 457 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 VSIG4Q9Y279 399 aa12.93□□□□□ -0.34
PDLIM7-201ENST00000355572 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 RBMXL2O75526 392 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 IGLV2-14P01704 120 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 PTHLHP12272 177 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 NEDD8Q15843 81 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 KCTD21Q4G0X4 260 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 TMEM65Q6PI78 240 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 UNQ5815/PRO19632Q6UWF5 114 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 Q6ZS49 121 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 OR10J5Q8NHC4 309 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 FCGR1BQ92637 280 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 RNF5Q99942 180 aa12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-201ENST00000355572 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 SERPINB10P48595 397 aa12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 DGCR2P98153 550 aa12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF616Q08AN1 781 aa12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 ZNF562Q6V9R5 426 aa12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 FLYWCH2Q96CP2 140 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 LSM4Q9Y4Z0 139 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-201ENST00000355572 METTL21EPA6NDL7 271 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 SPDEFO95238 335 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 APOA2P02652 100 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 DTYMKP23919 212 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 MRPS15P82914 257 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 FXYD3Q14802 87 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 TMEM177Q53S58 311 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 ACTBL2Q562R1 376 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 DPF1Q92782 380 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 GPHA2Q96T91 129 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 TSNAXQ99598 290 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 ST6GALNAC5Q9BVH7 336 aa12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 MRPS26Q9BYN8 205 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-201ENST00000355572 LOC100506127A0A0U1RQW1 187 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms