RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 P0C879 139 aa21.14■□□□□ 0.98
CLK2-201ENST00000355560 SAA2P0DJI9 122 aaPredicted RBP21.14■□□□□ 0.98
CLK2-201ENST00000355560 AGAP20933 346 aa21.14■□□□□ 0.98
CLK2-201ENST00000355560 PAX9P55771 341 aa21.14■□□□□ 0.98
CLK2-201ENST00000355560 TMEM200BQ69YZ2 307 aa21.14■□□□□ 0.98
CLK2-201ENST00000355560 LRBAP50851 2863 aa21.14■□□□□ 0.97
CLK2-201ENST00000355560 ERVFRD-1P60508 538 aa21.14■□□□□ 0.97
CLK2-201ENST00000355560 C1orf229Q6ZS94 237 aaPredicted RBP21.14■□□□□ 0.97
CLK2-201ENST00000355560 LYG1Q8N1E2 194 aa21.14■□□□□ 0.97
CLK2-201ENST00000355560 RAB40CQ96S21 281 aa21.14■□□□□ 0.97
CLK2-201ENST00000355560 GAB2Q9UQC2 676 aa21.14■□□□□ 0.97
CLK2-201ENST00000355560 TOR1AO14656 332 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 RAB29O14966 203 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 SYNGR2O43760 224 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 AANATQ16613 207 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 EIF5AL1Q6IS14 154 aaKnown RBP21.13■□□□□ 0.97
CLK2-201ENST00000355560 ZNF295-AS1Q8N0V1 137 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 RNF141Q8WVD5 230 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 BARX1Q9HBU1 254 aaPredicted RBP21.13■□□□□ 0.97
CLK2-201ENST00000355560 HRNRQ86YZ3 2850 aaPredicted RBP21.13■□□□□ 0.97
CLK2-201ENST00000355560 BORCS7-ASMTA0A0B4J1R7 106 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 MARCH11A6NNE9 402 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 ODF3L1Q8IXM7 274 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.13■□□□□ 0.97
CLK2-201ENST00000355560 LPAR3Q9UBY5 353 aa21.13■□□□□ 0.97
CLK2-201ENST00000355560 H3BP45 60 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 FBXO24O75426 580 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 OR10A7Q8NGE5 316 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 LRRC20Q8TCA0 184 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 REG4Q9BYZ8 158 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 RAB1BQ9H0U4 201 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 WSB1Q9Y6I7 421 aa21.12■□□□□ 0.97
CLK2-201ENST00000355560 MFSD2BA6NFX1 497 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 CST7O76096 145 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 SOD3P08294 240 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 RPL23AP62750 156 aaKnown RBP21.11■□□□□ 0.97
CLK2-201ENST00000355560 CLINT1Q14677 625 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 TOR2AQ5JU69 321 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 HEPN1Q6WQI6 88 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 H2BFWTQ7Z2G1 175 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 PRELID3BQ9Y3B1 194 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 IGSF10Q6WRI0 2623 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 I3L521 148 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 FGF16O43320 207 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 IAPPP10997 89 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 BAXQ07812 192 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 MIDNQ504T8 468 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 C11orf71Q6IPW1 123 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 SLC25A48Q6ZT89 311 aaKnown RBP21.11■□□□□ 0.97
CLK2-201ENST00000355560 S1PR3Q99500 378 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 ZNF251Q9BRH9 671 aa21.11■□□□□ 0.97
CLK2-201ENST00000355560 FAM90A26D6RGX4 464 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 HPRT1P00492 218 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 DAOP14920 347 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 MRPS11P82912 194 aaKnown RBP21.1■□□□□ 0.97
CLK2-201ENST00000355560 TMEM217Q8N7C4 229 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 R3HDM4Q96D70 268 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 FAM157CP0CG43 387 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 OR5C1Q8NGR4 320 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 DDB2Q92466 427 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 ARV1Q9H2C2 271 aa21.1■□□□□ 0.97
CLK2-201ENST00000355560 RBFOX2O43251 390 aaKnown RBP eCLIP21.09■□□□□ 0.974e-12■■□□□ 12.7
CLK2-201ENST00000355560 LY6HO94772 140 aa21.09■□□□□ 0.97
CLK2-201ENST00000355560 TNFRSF9Q07011 255 aa21.09■□□□□ 0.97
CLK2-201ENST00000355560 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.09■□□□□ 0.97
CLK2-201ENST00000355560 TXNL1O43396 289 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 IGHV2-70P01814 119 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 UBE2KP61086 200 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 STX12Q86Y82 276 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 ZNRD1Q9P1U0 126 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 HSPB7Q9UBY9 170 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 CFAP46Q8IYW2 2715 aa21.08■□□□□ 0.97
CLK2-201ENST00000355560 A0A1W2PPR1 153 aa21.08■□□□□ 0.96
CLK2-201ENST00000355560 KIR2DS2P43631 304 aa21.08■□□□□ 0.96
CLK2-201ENST00000355560 ZNF266Q14584 549 aa21.08■□□□□ 0.96
CLK2-201ENST00000355560 ZNF705EA8MWA4 302 aaPredicted RBP21.07■□□□□ 0.96
CLK2-201ENST00000355560 C19orf84I3L1E1 186 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 FSTL3O95633 263 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 DANCRP0C864 163 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 DYNLT3P51808 116 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 AVPI1Q5T686 147 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 GINS3Q9BRX5 216 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 PSENENQ9NZ42 101 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 RBMXL2O75526 392 aaKnown RBP21.07■□□□□ 0.96
CLK2-201ENST00000355560 THBS3P49746 956 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 TMEM267Q0VDI3 215 aaPredicted RBP21.07■□□□□ 0.96
CLK2-201ENST00000355560 HSD17B11Q8NBQ5 300 aa21.07■□□□□ 0.96
CLK2-201ENST00000355560 CACNA1BQ00975 2339 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 TMEM155Q4W5P6 130 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 SSX9Q7RTT3 188 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 OR1S2Q8NGQ3 325 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 OR4S2Q8NH73 311 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 RBKSQ9H477 322 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 USP24Q9UPU5 2620 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 DOCK11Q5JSL3 2073 aa21.06■□□□□ 0.96
CLK2-201ENST00000355560 SULT1A1P50225 295 aa21.05■□□□□ 0.96
CLK2-201ENST00000355560 HSD17B13Q7Z5P4 300 aaPredicted RBP21.05■□□□□ 0.96
CLK2-201ENST00000355560 DTX2Q86UW9 622 aa21.05■□□□□ 0.96
CLK2-201ENST00000355560 SMIM8Q96KF7 97 aa21.05■□□□□ 0.96
CLK2-201ENST00000355560 SESN1Q9Y6P5 492 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms