RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 C2orf83Q53S99 150 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 INO80CQ6PI98 192 aaPredicted RBP10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 SMOC1Q9H4F8 434 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 FGF16O43320 207 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 LIFP15018 202 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 SPINK2P20155 84 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 GCSAMQ8N6F7 178 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 HES7Q9BYE0 225 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 ITGB4P16144 1822 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 MGST3O14880 152 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 C1orf174Q8IYL3 243 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 TTC9CQ8N5M4 171 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZG16O60844 167 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 PRSS53Q2L4Q9 553 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 WDR31Q8NA23 367 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF488Q96MN9 340 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 SPAG17Q6Q759 2223 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 A0A1B0GTI1 187 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 K7N7A8 449 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 RAMP1O60894 148 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 BHLHA15Q7RTS1 189 aaPredicted RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 NEU1Q99519 415 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 F8VVB4 439 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 F8VWA3 439 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 TSPAN13O95857 204 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 CELA2BP08218 269 aaPredicted RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 PRDX2P32119 198 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HSPE1P61604 102 aaKnown RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 PSG4Q00888 419 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 C10orf126Q8N4M7 172 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR4D5Q8NGN0 318 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 SRSF12Q8WXF0 261 aaKnown RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 FAM157AC9JC47 383 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 MKRN2OSH3BPM6 223 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 SRSF5Q13243 272 aaKnown RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF818PQ6ZRF7 136 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BKO60814 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR2H2O95918 312 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BJP06899 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BOP23527 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BBP33778 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BDP58876 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BCP62807 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 MEF2CQ06413 473 aaPredicted RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST2H2BEQ16778 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF658BQ4V348 819 aaPredicted RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 RIPPLY2Q5TAB7 128 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BHQ93079 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 C5orf30Q96GV9 206 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BNQ99877 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BMQ99879 126 aa10.94□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR11H12B2RN74 326 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 SSTR5P35346 364 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR11H1Q8NG94 326 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR11H2Q8NH07 326 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 PKIBQ9C010 78 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 RPL27AP46776 148 aaKnown RBP10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 Q5PR19 223 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 J3KRW8 73 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 PPIHO43447 177 aaKnown RBP10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 FOXS1O43638 330 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF714Q96N38 554 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 TMEM106BQ9NUM4 274 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 FOCADQ5VW36 1801 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 K7EQS6 105 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF324BQ6AW86 544 aaPredicted RBP10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 SCN9AQ15858 1988 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 KCNMB1Q16558 191 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 RAB1CQ92928 201 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
SYNCRIP-201ENST00000355238 MARCH11A6NNE9 402 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 HEPN1Q6WQI6 88 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 C1QL4Q86Z23 238 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR51G1Q8NGK1 321 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 RPL31P62899 125 aaKnown RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 RELQ04864 619 aaPredicted RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 RTP5Q14D33 572 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 TNFRSF19Q9NS68 423 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 LHFPL6Q9Y693 200 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 LY75O60449 1722 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 TRGV8A0A0C4DH27 118 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 CA1P00915 261 aaPredicted RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 IGHMP01871 453 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 MC5RP33032 325 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 NXPH1P58417 271 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 KRTCAP3Q53RY4 240 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 LHX9Q9NQ69 397 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 C17orf51A8MQB3 221 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 LINC00614P0C842 121 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 CCL3P10147 92 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms