RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 M6PRP20645 277 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 LGALS4P56470 323 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 BAXQ07812 192 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 ZNF672Q499Z4 452 aaPredicted RBP9.22□□□□□ -0.93
SVIP-201ENST00000354193 Q6ZRG5 221 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 ZNF645Q8N7E2 425 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 GALNT14Q96FL9 552 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 JMJD1CQ15652 2540 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 IGHV3OR16-10A0A075B7F0 116 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 UBE2L5PA0A1B0GUS4 154 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 H0Y980 276 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 IGHV3-48P01763 117 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 APOA2P02652 100 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 GPR6P46095 362 aaPredicted RBP9.22□□□□□ -0.93
SVIP-201ENST00000354193 UCP3P55916 312 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 DAZAP2Q15038 168 aaPredicted RBP9.22□□□□□ -0.93
SVIP-201ENST00000354193 ZNF561Q8N587 486 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 RAB39BQ96DA2 213 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 DHRS9Q9BPW9 319 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 ZNF835Q9Y2P0 537 aa9.22□□□□□ -0.93
SVIP-201ENST00000354193 SHISA9B4DS77 424 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 FHITP49789 147 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 UTF1Q5T230 341 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 OR10Z1Q8NGY1 313 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 CD300LFQ8TDQ1 290 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 ZNF737O75373 536 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 CD8AP01732 235 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 EWSR1Q01844 656 aaKnown RBP eCLIP9.21□□□□□ -0.93
SVIP-201ENST00000354193 LCN15Q6UWW0 184 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 PLEKHA2Q9HB19 425 aa9.21□□□□□ -0.93
SVIP-201ENST00000354193 TMEM178BH3BS89 294 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 RGS13O14921 159 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 PPT1P50897 306 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 F2RL1P55085 397 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 FAM169BQ8N8A8 192 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 SFT2D1Q8WV19 159 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 RNF141Q8WVD5 230 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.21□□□□□ -0.94
SVIP-201ENST00000354193 FAM96BQ9Y3D0 163 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 MARCH11A6NNE9 402 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 TSPAN4O14817 238 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 DEDDO75618 318 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 CDS2O95674 445 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 SOD3P08294 240 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 DAOP14920 347 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 MORN2Q502X0 79 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 AKR1E2Q96JD6 320 aa9.21□□□□□ -0.94
SVIP-201ENST00000354193 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 WNK1Q9H4A3 2382 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 LINC00473A8K010 186 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 JTBO76095 146 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 HKR1P10072 659 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 UCP1P25874 307 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 Q6ZRM9 215 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 TMEM252Q8N6L7 170 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 GAFA1Q96PS6 74 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 DIRC2Q96SL1 478 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 KBTBD11-OT1A0A1B0GTJ5 212 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 CEACAM18A8MTB9 384 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 ESCO2Q56NI9 601 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 OR8B3Q8NGG8 313 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 OR8B2Q96RD0 313 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 TSNAXQ99598 290 aaKnown RBP9.2□□□□□ -0.94
SVIP-201ENST00000354193 ANAPC10Q9UM13 185 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 HMGN3Q15651 99 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 RTL8BQ17RB0 113 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 NUP37Q8NFH4 326 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 RPEQ96AT9 228 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 HARBI1Q96MB7 349 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 SH3BGRL3Q9H299 93 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 HEXA-AS1Q9H8Q6 139 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 IDI2-AS1Q9NZ38 188 aa9.2□□□□□ -0.94
SVIP-201ENST00000354193 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 PPIAL4CA0A0B4J2A2 164 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 F8W036 122 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 RAB29O14966 203 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 PPIAL4GP0DN37 164 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 BLOC1S1P78537 153 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 LCN2P80188 198 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 Q8NFD4 153 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 OR5T1Q8NG75 326 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 LURAP1Q96LR2 239 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 FAM212BQ9NTI7 297 aaPredicted RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 HBG1P69891 147 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 HBG2P69892 147 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 TRAT1Q6PIZ9 186 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 LDLRAD3Q86YD5 345 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 TGIF2LXQ8IUE1 241 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 HIPK2Q9H2X6 1198 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 STRAPQ9Y3F4 350 aaKnown RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 hCG_1809904A0A1W2PP81 198 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 A0A1W2PPE2 198 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 A0A1W2PR64 198 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 A0A1W2PRV1 198 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 CNIH1O95406 144 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 NMBP08949 121 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms