RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RNASEH2CQ8TDP1 164 aaKnown RBP20.53■□□□□ 0.88
CPNE1-202ENST00000352393 RAB24Q969Q5 203 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 COQ2Q96H96 371 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 CIB3Q96Q77 187 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-202ENST00000352393 OR5B12Q96R08 314 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 ELOVL1Q9BW60 279 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 UFSP2Q9NUQ7 469 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 LY86O95711 162 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 RTP5Q14D33 572 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 TCTEX1D1Q8N7M0 179 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 RHOVQ96L33 236 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 WNT9BO14905 357 aa20.52■□□□□ 0.88
CPNE1-202ENST00000352393 ZNF600Q6ZNG1 722 aa20.52■□□□□ 0.88
CPNE1-202ENST00000352393 AMBPP02760 352 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 TUBG1P23258 451 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 MPV17P39210 176 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 AESQ08117 197 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 BTNL3Q6UXE8 466 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 ANAPC16Q96DE5 110 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 NEIL1Q96FI4 390 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-202ENST00000352393 PTPRBP23467 1997 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 PPP5D1E7EU14 171 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 DVL1O14640 695 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 GYPAP02724 150 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 IGHV1-2P23083 117 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 UBE2NP61088 152 aaKnown RBP20.51■□□□□ 0.87
CPNE1-202ENST00000352393 C11orf53Q8IXP5 236 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 NINJ1Q92982 152 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 TAAR6Q96RI8 345 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 IL17BQ9UHF5 180 aa20.51■□□□□ 0.87
CPNE1-202ENST00000352393 MLNRO43193 412 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 PAX1P15863 534 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 FAM3BP58499 235 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-202ENST00000352393 RPS16P62249 146 aaKnown RBP20.5■□□□□ 0.87
CPNE1-202ENST00000352393 JOSD1Q15040 202 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-202ENST00000352393 RNFT1Q5M7Z0 435 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 DOCK11Q5JSL3 2073 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 TRGV5A0A0B4J1U4 118 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 PAGE4O60829 102 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 VENTXO95231 258 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 IFNA10P01566 189 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 DDTP30046 118 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 MPLP40238 635 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 Q6ZR03 302 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 ZNF826PQ6ZT77 177 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 H2BFWTQ7Z2G1 175 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 ZNF709Q8N972 641 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 MRGPRDQ8TDS7 321 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 TMEM170AQ8WVE7 144 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 GMPPAQ96IJ6 420 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-202ENST00000352393 DIRC2Q96SL1 478 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 PCGF1Q9BSM1 259 aa20.5■□□□□ 0.87
CPNE1-202ENST00000352393 TSTD3H0UI37 97 aa20.49■□□□□ 0.87
CPNE1-202ENST00000352393 GGCTO75223 188 aaKnown RBP20.49■□□□□ 0.87
CPNE1-202ENST00000352393 GNB2P62879 340 aa20.49■□□□□ 0.87
CPNE1-202ENST00000352393 PMP22Q01453 160 aa20.49■□□□□ 0.87
CPNE1-202ENST00000352393 TMEM164Q5U3C3 297 aa20.49■□□□□ 0.87
CPNE1-202ENST00000352393 Q8N7P7 452 aa20.49■□□□□ 0.87
CPNE1-202ENST00000352393 PRR7Q8TB68 274 aa20.49■□□□□ 0.87
CPNE1-202ENST00000352393 LINC00473A8K010 186 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 CD46P15529 392 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 HOXA4Q00056 320 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-202ENST00000352393 P2RY6Q15077 328 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 ZNF66Q6ZN08 573 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 REC114Q7Z4M0 266 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 KLF14Q8TD94 323 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-202ENST00000352393 OBP2BQ9NPH6 170 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 XKRY2A2RUG3 117 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 C17orf112F2Z3M2 114 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 TYMSP04818 313 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 PDLIM4P50479 330 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 TGFBR3Q03167 851 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 ACTL10Q5JWF8 245 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 ACP7Q6ZNF0 438 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 CXorf67Q86X51 503 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-202ENST00000352393 ACY3Q96HD9 319 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 PRO1933Q9H354 126 aa20.48■□□□□ 0.87
CPNE1-202ENST00000352393 A0A1W2PPQ1 181 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 C15orf62A8K5M9 175 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 WISP2O76076 250 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 DEFA4P12838 97 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 NPPCP23582 126 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 SRP14P37108 136 aaKnown RBP20.47■□□□□ 0.87
CPNE1-202ENST00000352393 GABRA2P47869 451 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 CDC34P49427 236 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-202ENST00000352393 SPINK9Q5DT21 86 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 ZNF891A8MT65 544 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-202ENST00000352393 LYZL6O75951 148 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 TFF1P04155 84 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 GZMBP10144 247 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 SSTR5P35346 364 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 UNQ6494/PRO21346Q6UXR6 183 aa20.47■□□□□ 0.87
CPNE1-202ENST00000352393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-202ENST00000352393 C11orf94C9JXX5 98 aa20.46■□□□□ 0.87
CPNE1-202ENST00000352393 ACOT6Q3I5F7 207 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-202ENST00000352393 DEFB123Q8N688 67 aa20.46■□□□□ 0.87
CPNE1-202ENST00000352393 OR2T10Q8NGZ9 312 aa20.46■□□□□ 0.87
CPNE1-202ENST00000352393 HSD17B10Q99714 261 aaKnown RBP20.46■□□□□ 0.87
CPNE1-202ENST00000352393 ZDHHC11Q9H8X9 412 aa20.46■□□□□ 0.87
CPNE1-202ENST00000352393 MARCH11A6NNE9 402 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms