RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 GNG10P50151 68 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 UCP3P55916 312 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 CD177Q8N6Q3 437 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 CYB561D1Q8N8Q1 229 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 COQ2Q96H96 371 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 COL25A1Q9BXS0 654 aaPredicted RBP11.65□□□□□ -0.54
TRIM4-201ENST00000349062 SLC25A15Q9Y619 301 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 TRGV8A0A0C4DH27 118 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 SCAF4O95104 1147 aaKnown RBP11.65□□□□□ -0.54
TRIM4-201ENST00000349062 COX5AP20674 150 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 ELLP55199 621 aaPredicted RBP11.65□□□□□ -0.54
TRIM4-201ENST00000349062 UTF1Q5T230 341 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 Q6ZS92 163 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 Q8IYB0 196 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 Q8WTZ3 238 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 TMEM171Q8WVE6 324 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 PLEKHF2Q9H8W4 249 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 RAB11AP62491 216 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 P2RY6Q15077 328 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 SPACA3Q8IXA5 215 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 NECAP1Q8NC96 275 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 PLXNB1O43157 2135 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 A0A087X0M5 115 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 A0A1B0GX30 115 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 PPIHO43447 177 aaKnown RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 FOSL1P15407 271 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 NDUFB7P17568 137 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 HOXA5P20719 270 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 SELENOVP59797 346 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 RPL23AP62750 156 aaKnown RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 LILRB2Q8N423 598 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 BOD1Q96IK1 185 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 SNX22Q96L94 193 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 SSX3Q99909 188 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 RSG1Q9BU20 258 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 MRPL37Q9BZE1 423 aaKnown RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 ZFYVE26Q68DK2 2539 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 CRYABP02511 175 aaKnown RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 ATP6V0CP27449 155 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 RND3P61587 244 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 Q8NFD4 153 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 CCL13Q99616 98 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 UNKLQ9H9P5 680 aaKnown RBP11.64□□□□□ -0.55
TRIM4-201ENST00000349062 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 GNG13Q9P2W3 67 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 CLN8Q9UBY8 286 aa11.64□□□□□ -0.55
TRIM4-201ENST00000349062 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 C17orf98A8MV24 154 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 OPN1MWP04001 364 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 GAPDHP04406 335 aaKnown RBP11.63□□□□□ -0.55
TRIM4-201ENST00000349062 OPN1MW2P0DN77 364 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 OPN1MW3P0DN78 364 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 SRPXP78539 464 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 FAM185AQ8N0U4 392 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 OR5T1Q8NG75 326 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 NIPSNAP3BQ9BS92 247 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 S1PR2O95136 353 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 GYPAP02724 150 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 SOD3P08294 240 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 SEC11BP0C7V7 166 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 MMP9P14780 707 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 UCP1P25874 307 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 P2RY1P47900 373 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 ERVK11-1P61568 191 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 ZNF880Q6PDB4 577 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
TRIM4-201ENST00000349062 WSB1Q9Y6I7 421 aa11.63□□□□□ -0.55
TRIM4-201ENST00000349062 SOX15O60248 233 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 FCGR3BO75015 233 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 CGAP01215 116 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 LYL1P12980 280 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 RPL39P5Q59GN2 51 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 DOLPP1Q86YN1 238 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 DMRTC2Q8IXT2 367 aaPredicted RBP11.62□□□□□ -0.55
TRIM4-201ENST00000349062 CCL17Q92583 94 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 PSENENQ9NZ42 101 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 BTBD17A6NE02 478 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 TNFAIP6P98066 277 aaPredicted RBP11.62□□□□□ -0.55
TRIM4-201ENST00000349062 RTP5Q14D33 572 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 SSX2Q16385 188 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 KHDC3LQ587J8 217 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms