RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 COX6A1P12074 109 aa15.04■□□□□ -0
APP-202ENST00000348990 GGNQ86UU5 652 aa15.04■□□□□ -0
APP-202ENST00000348990 TUSC5Q8IXB3 177 aa15.04■□□□□ -0
APP-202ENST00000348990 VPS13AQ96RL7 3174 aa15.04■□□□□ -0
APP-202ENST00000348990 TOX3O15405 576 aaPredicted RBP15.04■□□□□ -0
APP-202ENST00000348990 GRPP07492 148 aa15.04■□□□□ -0
APP-202ENST00000348990 CRISP2P16562 243 aa15.04■□□□□ -0
APP-202ENST00000348990 PDLIM4P50479 330 aa15.04■□□□□ -0
APP-202ENST00000348990 ZNF114Q8NC26 417 aa15.04■□□□□ -0
APP-202ENST00000348990 SPSB4Q96A44 273 aa15.04■□□□□ -0
APP-202ENST00000348990 FAM234AQ9H0X4 552 aa15.04■□□□□ -0
APP-202ENST00000348990 PRRC2CQ9Y520 2896 aaKnown RBP15.04■□□□□ -0
APP-202ENST00000348990 RNF212BA8MTL3 300 aa15.04■□□□□ -0
APP-202ENST00000348990 UMODP07911 640 aa15.04■□□□□ -0
APP-202ENST00000348990 SELEP16581 610 aa15.04■□□□□ -0
APP-202ENST00000348990 CEBPDP49716 269 aaPredicted RBP15.04■□□□□ -0
APP-202ENST00000348990 GNB1P62873 340 aa15.04■□□□□ -0
APP-202ENST00000348990 RIPPLY2Q5TAB7 128 aa15.04■□□□□ -0
APP-202ENST00000348990 DMRTA1Q5VZB9 504 aa15.04■□□□□ -0
APP-202ENST00000348990 FRYQ5TBA9 3013 aa15.03■□□□□ -0
APP-202ENST00000348990 MAP1BP46821 2468 aaKnown RBP15.03■□□□□ -0
APP-202ENST00000348990 ODAMA1E959 279 aa15.03■□□□□ -0
APP-202ENST00000348990 S1PR2O95136 353 aa15.03■□□□□ -0
APP-202ENST00000348990 TNFSF10P50591 281 aa15.03■□□□□ -0
APP-202ENST00000348990 RAB30Q15771 203 aa15.03■□□□□ -0
APP-202ENST00000348990 PDLIM3Q53GG5 364 aaPredicted RBP15.03■□□□□ -0
APP-202ENST00000348990 TMEM14EPQ6UXP3 125 aa15.03■□□□□ -0
APP-202ENST00000348990 DLEU1O43261 78 aa15.03■□□□□ -0
APP-202ENST00000348990 LINC00205P59089 165 aa15.03■□□□□ -0
APP-202ENST00000348990 LCN2P80188 198 aa15.03■□□□□ -0
APP-202ENST00000348990 SRSF7Q16629 238 aaKnown RBP eCLIP15.03■□□□□ -0
APP-202ENST00000348990 SAXO1Q8IYX7 474 aa15.03■□□□□ -0
APP-202ENST00000348990 IMMP1LQ96LU5 166 aa15.03■□□□□ -0
APP-202ENST00000348990 DEFB108AA8MXU0 73 aa15.02■□□□□ -0
APP-202ENST00000348990 SLC17A3O00476 420 aa15.02■□□□□ -0
APP-202ENST00000348990 VENTXO95231 258 aa15.02■□□□□ -0
APP-202ENST00000348990 OR2H2O95918 312 aa15.02■□□□□ -0
APP-202ENST00000348990 RAB4AP20338 218 aa15.02■□□□□ -0
APP-202ENST00000348990 ARSJQ5FYB0 599 aaPredicted RBP15.02■□□□□ -0
APP-202ENST00000348990 RFESDQ8TAC1 157 aa15.02■□□□□ -0
APP-202ENST00000348990 IGHV3-43A0A0B4J1X8 118 aa15.02■□□□□ -0
APP-202ENST00000348990 IGHV3-43DP0DP04 118 aa15.02■□□□□ -0
APP-202ENST00000348990 FOLR3P41439 243 aa15.02■□□□□ -0
APP-202ENST00000348990 SFRP2Q96HF1 295 aa15.02■□□□□ -0
APP-202ENST00000348990 BTF3L4Q96K17 158 aa15.02■□□□□ -0
APP-202ENST00000348990 C12orf49Q9H741 205 aa15.02■□□□□ -0
APP-202ENST00000348990 TMEM106BQ9NUM4 274 aa15.02■□□□□ -0
APP-202ENST00000348990 TIMM9Q9Y5J7 89 aa15.02■□□□□ -0
APP-202ENST00000348990 FCN1O00602 326 aa15.02□□□□□ -0.01
APP-202ENST00000348990 RNPS1Q15287 305 aaKnown RBP15.02□□□□□ -0.01
APP-202ENST00000348990 ATP6V1FQ16864 119 aa15.02□□□□□ -0.01
APP-202ENST00000348990 CXorf67Q86X51 503 aaPredicted RBP15.02□□□□□ -0.01
APP-202ENST00000348990 CBY1Q9Y3M2 126 aa15.02□□□□□ -0.01
APP-202ENST00000348990 MED12LQ86YW9 2145 aa15.01□□□□□ -0.01
APP-202ENST00000348990 CDIPTO14735 213 aa15.01□□□□□ -0.01
APP-202ENST00000348990 IER3P46695 156 aa15.01□□□□□ -0.01
APP-202ENST00000348990 PCP4P48539 62 aa15.01□□□□□ -0.01
APP-202ENST00000348990 B3GALT5-AS1P59052 145 aa15.01□□□□□ -0.01
APP-202ENST00000348990 TMEM183BQ1AE95 376 aa15.01□□□□□ -0.01
APP-202ENST00000348990 ACSF3Q4G176 576 aaPredicted RBP15.01□□□□□ -0.01
APP-202ENST00000348990 AGBL5Q8NDL9 886 aa15.01□□□□□ -0.01
APP-202ENST00000348990 OR10G8Q8NGN5 311 aa15.01□□□□□ -0.01
APP-202ENST00000348990 PXMP4Q9Y6I8 212 aa15.01□□□□□ -0.01
APP-202ENST00000348990 TRAV34A0A0B4J273 112 aa15.01□□□□□ -0.01
APP-202ENST00000348990 MARCH11A6NNE9 402 aa15.01□□□□□ -0.01
APP-202ENST00000348990 M0QZK8 103 aa15.01□□□□□ -0.01
APP-202ENST00000348990 DNPH1O43598 174 aa15.01□□□□□ -0.01
APP-202ENST00000348990 SERF1AO75920 110 aa15.01□□□□□ -0.01
APP-202ENST00000348990 IGLV2-14P01704 120 aa15.01□□□□□ -0.01
APP-202ENST00000348990 CATR1Q13166 79 aa15.01□□□□□ -0.01
APP-202ENST00000348990 Q8NFD4 153 aa15.01□□□□□ -0.01
APP-202ENST00000348990 OR52L2PQ8NGH6 319 aa15.01□□□□□ -0.01
APP-202ENST00000348990 DIRC2Q96SL1 478 aa15.01□□□□□ -0.01
APP-202ENST00000348990 ZNF503-AS2A6NEH8 195 aa15.01□□□□□ -0.01
APP-202ENST00000348990 TMEM210A6NLX4 147 aa15.01□□□□□ -0.01
APP-202ENST00000348990 LRRC30A6NM36 301 aa15.01□□□□□ -0.01
APP-202ENST00000348990 SRFP11831 508 aa15.01□□□□□ -0.01
APP-202ENST00000348990 SOX8P57073 446 aa15.01□□□□□ -0.01
APP-202ENST00000348990 OR5AU1Q8NGC0 362 aa15.01□□□□□ -0.01
APP-202ENST00000348990 FAM166BA8MTA8 275 aa15□□□□□ -0.01
APP-202ENST00000348990 RBFOX2O43251 390 aaKnown RBP eCLIP15□□□□□ -0.015e-8■□□□□ 9.2
APP-202ENST00000348990 TCF21O43680 179 aa15□□□□□ -0.01
APP-202ENST00000348990 CDKN1AP38936 164 aa15□□□□□ -0.01
APP-202ENST00000348990 RPL30P62888 115 aaKnown RBP15□□□□□ -0.01
APP-202ENST00000348990 HTD2P86397 168 aa15□□□□□ -0.01
APP-202ENST00000348990 C17orf98A8MV24 154 aa15□□□□□ -0.01
APP-202ENST00000348990 PDE6DO43924 150 aa15□□□□□ -0.01
APP-202ENST00000348990 TYMSP04818 313 aa15□□□□□ -0.01
APP-202ENST00000348990 CFIP05156 583 aa15□□□□□ -0.01
APP-202ENST00000348990 SFTPCP11686 197 aa15□□□□□ -0.01
APP-202ENST00000348990 SLC35B1P78383 322 aa15□□□□□ -0.01
APP-202ENST00000348990 SPINK14Q6IE38 97 aa15□□□□□ -0.01
APP-202ENST00000348990 GABRA2P47869 451 aa14.99□□□□□ -0.01
APP-202ENST00000348990 DCAF10Q5QP82 559 aa14.99□□□□□ -0.01
APP-202ENST00000348990 TPRX1Q8N7U7 411 aa14.99□□□□□ -0.01
APP-202ENST00000348990 SIGLECL1Q8N7X8 197 aa14.99□□□□□ -0.01
APP-202ENST00000348990 SSMEM1Q8WWF3 244 aa14.99□□□□□ -0.01
APP-202ENST00000348990 HEYLQ9NQ87 328 aaPredicted RBP14.99□□□□□ -0.01
APP-202ENST00000348990 PPIAL4AQ9Y536 164 aa14.99□□□□□ -0.01
APP-202ENST00000348990 KRTAP27-1Q3LI81 207 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms