RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TRIP6Q15654 476 aaKnown RBP5.03□□□□□ -1.6
CLCN3-201ENST00000347613 LRRC75BQ2VPJ9 315 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 NCR3LG1Q68D85 454 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 ZNRF1Q8ND25 227 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 CLUHP3Q96NS8 147 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 OBP2BQ9NPH6 170 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 AURKAIP1Q9NWT8 199 aaPredicted RBP5.03□□□□□ -1.6
CLCN3-201ENST00000347613 KIAA1456Q9P272 454 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 MUC6Q6W4X9 2439 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 IGKV1D-17A0A075B6S4 117 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 C15orf65H3BRN8 121 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 SOX15O60248 233 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 FCN3O75636 299 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 TBC1D28Q2M2D7 210 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 RNF212Q495C1 297 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 C4orf17Q53FE4 359 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 WDR25Q64LD2 544 aaPredicted RBP5.03□□□□□ -1.6
CLCN3-201ENST00000347613 ACP7Q6ZNF0 438 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 FAM214BQ7L5A3 538 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 DEFB124Q8NES8 71 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 IL22RA2Q969J5 263 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 WDR61Q9GZS3 305 aaKnown RBP5.03□□□□□ -1.6
CLCN3-201ENST00000347613 FAM234AQ9H0X4 552 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 ASCL3Q9NQ33 180 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 PLXNB1O43157 2135 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BKO60814 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 NDUFS6O75380 124 aaKnown RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 CGAP01215 116 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BJP06899 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BOP23527 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BBP33778 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RAB5CP51148 216 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BDP58876 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RAB11AP62491 216 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BCP62807 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RPP30P78346 268 aaKnown RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 POLEQ07864 2286 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 OR8G1Q15617 311 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST2H2BEQ16778 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RPL39P5Q59GN2 51 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM14EPQ6UXP3 125 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 UNQ6494/PRO21346Q6UXR6 183 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BHQ93079 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 STARD4Q96DR4 205 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 GMPPAQ96IJ6 420 aaPredicted RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BNQ99877 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 HIST1H2BMQ99879 126 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 ELOVL1Q9BW60 279 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 SLC25A31Q9H0C2 315 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 PLK3Q9H4B4 646 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 PGPEP1LA6NFU8 196 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 C1orf196B1AJZ1 125 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RPS10P46783 165 aaKnown RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 SRPXP78539 464 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 TNFRSF9Q07011 255 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 PYY3Q5JQD4 70 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 Q6ZT83 130 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF561Q8N587 486 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 FRZBQ92765 325 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RTL8AQ9BWD3 113 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM9BQ9NQ34 198 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 RBM7Q9Y580 266 aaKnown RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 MMP23AO75900 390 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 CTXN2P0C2S0 81 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 PF4V1P10720 104 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 BAXQ07812 192 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 EDDM3AQ14507 147 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 ASPHD1Q5U4P2 390 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 SSX9Q7RTT3 188 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 COMMD1Q8N668 190 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 OR8G5Q8NG78 346 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 LSM10Q969L4 123 aaKnown RBP5.02□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM204Q9BSN7 226 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 SLC25A22Q9H936 323 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 DOK5Q9P104 306 aa5.02□□□□□ -1.61
CLCN3-201ENST00000347613 TANC2Q9HCD6 1990 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 DUXBA0A1W2PPF3 345 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 AHRRA9YTQ3 701 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 CYB5BO43169 146 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 IGHG3P01860 377 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF806P0C7X5 589 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 CD200P41217 278 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 GABRA2P47869 451 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 PCP4P48539 62 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 RHEBQ15382 184 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 AKR1C8PQ5T2L2 129 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 LINC00596Q86U02 117 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 FAM90A1Q86YD7 464 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZCCHC24Q8N2G6 241 aaKnown RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF645Q8N7E2 425 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 OR51G1Q8NGK1 321 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 TAF15Q92804 592 aaKnown RBP eCLIP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 FAM122AQ96E09 287 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 MALSU1Q96EH3 234 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 DERL1Q9BUN8 251 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 HSPB7Q9UBY9 170 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 PSG11Q9UQ72 335 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms