RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ARTNQ5T4W7 220 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM108Q6UXF1 575 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
SRPK1-201ENST00000346162 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
SRPK1-201ENST00000346162 SRSF10O75494 262 aaKnown RBP13.35□□□□□ -0.27
SRPK1-201ENST00000346162 IGHV2-5P01817 119 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 MELTFP08582 738 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 DEFA4P12838 97 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 RPS11P62280 158 aaKnown RBP eCLIP13.35□□□□□ -0.27
SRPK1-201ENST00000346162 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM167BQ9NRX6 74 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 LHFPL6Q9Y693 200 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 IGHV1-45A0A0A0MS14 117 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 DEFB108AA8MXU0 73 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 FAM157CP0CG43 387 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM211Q6ICI0 200 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 CYP2G1PQ6ZSU1 146 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
SRPK1-201ENST00000346162 PSG11Q9UQ72 335 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 SBF1O95248 1867 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 NUDT16L1Q9BRJ7 211 aaKnown RBP13.35□□□□□ -0.27
SRPK1-201ENST00000346162 CDC42EP3Q9UKI2 254 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 COX7A2P2O60397 106 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 RPL13AP40429 203 aaKnown RBP13.35□□□□□ -0.27
SRPK1-201ENST00000346162 UBE2V1Q13404 147 aa13.35□□□□□ -0.27
SRPK1-201ENST00000346162 ITGB1BP1O14713 200 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 BCL3P20749 454 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 WDYHV1Q96HA8 205 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 TXNDC17Q9BRA2 123 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 TMEM250H0YL14 139 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 CDIPTO14735 213 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 HLA-DQA1P01909 254 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 ERHP84090 104 aaKnown RBP13.34□□□□□ -0.27
SRPK1-201ENST00000346162 LYRM7Q5U5X0 104 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 FDX2Q6P4F2 183 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 ST6GALNAC6Q969X2 333 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 TRGV8A0A0C4DH27 118 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 PSG4Q00888 419 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 LRRC29Q8WV35 223 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 IMMP2LQ96T52 175 aa13.34□□□□□ -0.27
SRPK1-201ENST00000346162 TNFRSF1AP19438 455 aa13.33□□□□□ -0.27
SRPK1-201ENST00000346162 SMAGPQ0VAQ4 97 aa13.33□□□□□ -0.27
SRPK1-201ENST00000346162 OR5A2Q8NGI9 324 aa13.33□□□□□ -0.27
SRPK1-201ENST00000346162 MRGPRDQ8TDS7 321 aa13.33□□□□□ -0.27
SRPK1-201ENST00000346162 SAP30LQ9HAJ7 183 aa13.33□□□□□ -0.27
SRPK1-201ENST00000346162 SH2D2AQ9NP31 389 aa13.33□□□□□ -0.27
SRPK1-201ENST00000346162 LEPROTL1O95214 131 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 TIAF1O95411 115 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 TIMD4Q96H15 378 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 DMRTA2Q96SC8 542 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 DIRC2Q96SL1 478 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 SLC7A10Q9NS82 523 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 TRBV24-1A0A075B6N3 115 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 CORTO00230 105 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 FCGR3BO75015 233 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 NMUP48645 174 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 MRGPRFQ96AM1 343 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 GLRX2Q9NS18 164 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 ZNF355PQ9NSJ1 428 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 FAM206AQ9NX38 181 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
SRPK1-201ENST00000346162 J3QT63 122 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 Q1RN00 199 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 OR8A1Q8NGG7 326 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 CYTL1Q9NRR1 136 aa13.33□□□□□ -0.28
SRPK1-201ENST00000346162 IGHV3-43A0A0B4J1X8 118 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 SERF1AO75920 110 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 IGLV3-19P01714 112 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 IGHV3-43DP0DP04 118 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 GFRALQ6UXV0 394 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 HEATR5BQ9P2D3 2071 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 IGKV3D-11A0A0A0MRZ8 115 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 EGR1P18146 543 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 GAS1P54826 345 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 IGFBP7Q16270 282 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 PILRBQ9UKJ0 227 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 S1PR2O95136 353 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 GBGT1Q8N5D6 347 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 OR4P4Q8NGL7 312 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 CLDND2Q8NHS1 167 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 SP1P08047 785 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 CCL20P78556 96 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 DMWDQ09019 674 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 ICAM4Q14773 271 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 ABHD14AQ9BUJ0 271 aa13.32□□□□□ -0.28
SRPK1-201ENST00000346162 MTCL1Q9Y4B5 1905 aaKnown RBP13.32□□□□□ -0.28
SRPK1-201ENST00000346162 PRSS1P07477 247 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 TPTE2P1Q5T6R2 138 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 MED12Q93074 2177 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 PSG5Q15238 335 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 LINC00114Q6XXX2 140 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 FLVCR1-AS1Q8TAF5 88 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms