RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ADGRG4Q8IZF6 3080 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 SPINT2O43291 252 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 IGHV3-13P01766 116 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 IGHV3-7P01780 117 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 ELLP55199 621 aaPredicted RBP12.84□□□□□ -0.35
UPF3B-202ENST00000345865 RAB5BP61020 215 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
UPF3B-202ENST00000345865 NKX6-1P78426 367 aaPredicted RBP12.84□□□□□ -0.35
UPF3B-202ENST00000345865 SERF2P84101 59 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 TIMM23BQ5SRD1 257 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 ZNF787Q6DD87 383 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 MOGAT3Q86VF5 341 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 C1orf174Q8IYL3 243 aa12.84□□□□□ -0.35
UPF3B-202ENST00000345865 RBMXL3Q8N7X1 1067 aaKnown RBP12.84□□□□□ -0.35
UPF3B-202ENST00000345865 PARD6GQ9BYG4 376 aaPredicted RBP12.84□□□□□ -0.35
UPF3B-202ENST00000345865 ANKRD11Q6UB99 2663 aaPredicted RBP12.84□□□□□ -0.35
UPF3B-202ENST00000345865 ZFP92A6NM28 416 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 RAB29O14966 203 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 OR2C1O95371 312 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 ADH4P08319 380 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 SELLP14151 372 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 CFHR2P36980 270 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 ZNF134P52741 427 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 RAB2AP61019 212 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 DLK1P80370 383 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 MORN2Q502X0 79 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 FAM90A2PQ658T7 463 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 H2BFWTQ7Z2G1 175 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 RPP25LQ8N5L8 163 aaKnown RBP12.83□□□□□ -0.36
UPF3B-202ENST00000345865 DTD1Q8TEA8 209 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 MUCL1Q96DR8 90 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.36
UPF3B-202ENST00000345865 UNKLQ9H9P5 680 aaKnown RBP12.83□□□□□ -0.36
UPF3B-202ENST00000345865 MARCH11A6NNE9 402 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 SPRY3O43610 288 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 DUTP33316 252 aaKnown RBP12.82□□□□□ -0.36
UPF3B-202ENST00000345865 LOXL3P58215 753 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 TMEM41BQ5BJD5 291 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 ADAM5Q6NVV9 412 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
UPF3B-202ENST00000345865 DSCAML1Q8TD84 2053 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 LHBP01229 141 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 CRYAAP02489 173 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 BCL2P10415 239 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 MAS1LP35410 378 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 GLRXP35754 106 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 TAGLN2P37802 199 aaKnown RBP12.82□□□□□ -0.36
UPF3B-202ENST00000345865 MZT1Q08AG7 82 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 RTP5Q14D33 572 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 C1orf229Q6ZS94 237 aaPredicted RBP12.82□□□□□ -0.36
UPF3B-202ENST00000345865 ZNF561Q8N587 486 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 Q8TCH9 128 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 ITLN1Q8WWA0 313 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 SNX22Q96L94 193 aa12.82□□□□□ -0.36
UPF3B-202ENST00000345865 C5orf52A6NGY3 159 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 ZNF98A6NK75 572 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 MGST3O14880 152 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 OR9G9P0C7N8 305 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 GZMHP20718 246 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 KLF3P57682 345 aaPredicted RBP12.81□□□□□ -0.36
UPF3B-202ENST00000345865 FAM27E3Q08E93 113 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 C1orf185Q5T7R7 199 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 DUX4L9Q6RFH8 374 aaPredicted RBP12.81□□□□□ -0.36
UPF3B-202ENST00000345865 FAM180AQ6UWF9 173 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 CENPVQ7Z7K6 275 aaPredicted RBP12.81□□□□□ -0.36
UPF3B-202ENST00000345865 TCTEX1D1Q8N7M0 179 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 CA5BP1Q8WTZ4 195 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 CISD1Q9NZ45 108 aaKnown RBP12.81□□□□□ -0.36
UPF3B-202ENST00000345865 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 KALRNO60229 2985 aa12.81□□□□□ -0.36
UPF3B-202ENST00000345865 OR2B8PP59922 312 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 RAB11AP62491 216 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 EIF2S3LQ2VIR3 472 aaKnown RBP12.8□□□□□ -0.36
UPF3B-202ENST00000345865 RPL39P5Q59GN2 51 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 ZNF343Q6P1L6 599 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 TRAT1Q6PIZ9 186 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
UPF3B-202ENST00000345865 MRPL37Q9BZE1 423 aaKnown RBP12.8□□□□□ -0.36
UPF3B-202ENST00000345865 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
UPF3B-202ENST00000345865 GVINP1Q7Z2Y8 2422 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 IGLV3-9A0A075B6K5 115 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 MAP1LC3B2A6NCE7 125 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 FCGR3BO75015 233 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 RBMXL2O75526 392 aaKnown RBP12.8□□□□□ -0.36
UPF3B-202ENST00000345865 TIMP3P35625 211 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 EIF2S3P41091 472 aaKnown RBP12.8□□□□□ -0.36
UPF3B-202ENST00000345865 GPR12P47775 334 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 EDDM3BP56851 147 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 TFF3Q07654 80 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 HEPN1Q6WQI6 88 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 OR10G4Q8NGN3 311 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 R3HDM4Q96D70 268 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 TVP23CQ96ET8 276 aa12.8□□□□□ -0.36
UPF3B-202ENST00000345865 NIPSNAP3BQ9BS92 247 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms