RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FAM103A1Q9BTL3 118 aaKnown RBP9.64□□□□□ -0.87
SGCA-202ENST00000344627 ALX4Q9H161 411 aaPredicted RBP9.64□□□□□ -0.87
SGCA-202ENST00000344627 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
SGCA-202ENST00000344627 SLC35D1Q9NTN3 355 aa9.64□□□□□ -0.87
SGCA-202ENST00000344627 SCOCQ9UIL1 159 aa9.64□□□□□ -0.87
SGCA-202ENST00000344627 GAB2Q9UQC2 676 aa9.64□□□□□ -0.87
SGCA-202ENST00000344627 A0A0B4J203 849 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 METTL21EPA6NDL7 271 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 IFITM5A6NNB3 132 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 I3L521 148 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 LDLRAD4O15165 306 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 SLC25A17O43808 307 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 CA2P00918 260 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 IGKV1-16P04430 117 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 FCGR3AP08637 254 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 OR8U9P0C7N5 309 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 PSMB9P28065 219 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 SERPINB10P48595 397 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 CBX3Q13185 183 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 KIAA0141Q14154 515 aaPredicted RBP9.63□□□□□ -0.87
SGCA-202ENST00000344627 IGSF11Q5DX21 431 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 PYHIN1Q6K0P9 492 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 PDPNQ86YL7 162 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 ZNF383Q8NA42 475 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 MINDY2Q8NBR6 621 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 LFNGQ8NES3 379 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 GRPEL2Q8TAA5 225 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 DCUN1D4Q92564 292 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 FLYWCH2Q96CP2 140 aaKnown RBP9.63□□□□□ -0.87
SGCA-202ENST00000344627 GINS4Q9BRT9 223 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 ATG5Q9H1Y0 275 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 OR2D2Q9H210 308 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 ZNF230Q9UIE0 474 aaPredicted RBP9.63□□□□□ -0.87
SGCA-202ENST00000344627 NUBP2Q9Y5Y2 271 aa9.63□□□□□ -0.87
SGCA-202ENST00000344627 TRDV1A0A1B0GX56 115 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 LINC01619G3V211 115 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 OVOL1O14753 267 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 IGHV3-11P01762 117 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 EGR2P11161 476 aaPredicted RBP9.62□□□□□ -0.87
SGCA-202ENST00000344627 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
SGCA-202ENST00000344627 SLURP1P55000 103 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 TPPP2P59282 170 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 FXYD3Q14802 87 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 ZNF562Q6V9R5 426 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 OR6Q1Q8NGQ2 317 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 NDUFB11Q9NX14 153 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 KCNK7Q9Y2U2 307 aa9.62□□□□□ -0.87
SGCA-202ENST00000344627 SHISA3A0PJX4 238 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 J3QRK9 145 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 SHOXO15266 292 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 SOX15O60248 233 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 PROP1O75360 226 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 SAP30O75446 220 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 SPDEFO95238 335 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
SGCA-202ENST00000344627 HIST1H1DP16402 221 aaKnown RBP9.61□□□□□ -0.87
SGCA-202ENST00000344627 RAB6AP20340 208 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 AKIRIN2Q53H80 203 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 ASPHD1Q5U4P2 390 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.61□□□□□ -0.87
SGCA-202ENST00000344627 OR5T1Q8NG75 326 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 ARPC1AQ92747 370 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 ASCL2Q99929 193 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 ZMAT4Q9H898 229 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 SDHAF2Q9NX18 166 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 RYR3Q15413 4870 aa9.61□□□□□ -0.87
SGCA-202ENST00000344627 RAB27BO00194 218 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 MFNGO00587 321 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 TRGV3P03979 118 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
SGCA-202ENST00000344627 LGALS1P09382 135 aaKnown RBP9.6□□□□□ -0.87
SGCA-202ENST00000344627 GABARAPL2P60520 117 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 RTL8BQ17RB0 113 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 CD200R1LQ6Q8B3 271 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 BVESQ8NE79 360 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 MUC7Q8TAX7 377 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
SGCA-202ENST00000344627 HARBI1Q96MB7 349 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 ST6GALNAC5Q9BVH7 336 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 TOLLIPQ9H0E2 274 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 SSR3Q9UNL2 185 aa9.6□□□□□ -0.87
SGCA-202ENST00000344627 IGHV4OR15-8A0A075B7B6 117 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 A0A087WW49 117 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 TRBV6-7A0A0A0MS04 114 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 C13orf42A0A1B0GVH6 325 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 LGALS7P47929 136 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 PJVKQ0ZLH3 352 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 CDNFQ49AH0 187 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 SPARTQ8N0X7 666 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 PHB2Q99623 299 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 DCUN1D5Q9BTE7 237 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 CABLES2Q9BTV7 478 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 YTHDF1Q9BYJ9 559 aaKnown RBP9.59□□□□□ -0.87
SGCA-202ENST00000344627 SLA2Q9H6Q3 261 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 DAPK2Q9UIK4 370 aa9.59□□□□□ -0.87
SGCA-202ENST00000344627 ELF5Q9UKW6 265 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms