RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 TAS2R3Q9NYW6 316 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 A0A1B0GU03 582 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 IGSF23A1L1A6 192 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 RNF212BA8MTL3 300 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 CATR1Q13166 79 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 MSMO1Q15800 293 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 CLLU1Q5K131 121 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 HEPN1Q6WQI6 88 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 DDB2Q92466 427 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 A6NNC1 897 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 H3BP45 60 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 UBA52P62987 128 aaKnown RBP11.11□□□□□ -0.63
CDC42-202ENST00000344548 TMEM155Q4W5P6 130 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 MIDNQ504T8 468 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 ESCO2Q56NI9 601 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
CDC42-202ENST00000344548 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 NUP62P37198 522 aaPredicted RBP11.11□□□□□ -0.63
CDC42-202ENST00000344548 P2RY1P47900 373 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 MRPS11P82912 194 aaKnown RBP11.11□□□□□ -0.63
CDC42-202ENST00000344548 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDC42-202ENST00000344548 CITED4Q96RK1 184 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
CDC42-202ENST00000344548 SPG11Q96JI7 2443 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 WRBO00258 174 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
CDC42-202ENST00000344548 NDUFA2O43678 99 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 CAV2P51636 162 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 SSX9Q7RTT3 188 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 OR2C3Q8N628 320 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 STOML3Q8TAV4 291 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 TMED6Q8WW62 240 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 GAL3ST2Q9H3Q3 398 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 PLEKHA2Q9HB19 425 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 LEUTXA8MZ59 168 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 RAB29O14966 203 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 CST7O76096 145 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 OR9G9P0C7N8 305 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 IAPPP10997 89 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 SLC25A6P12236 298 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 EWSR1Q01844 656 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDC42-202ENST00000344548 BAP18Q8IXM2 172 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 TMEM252Q8N6L7 170 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 RFNGQ9Y644 331 aa11.1□□□□□ -0.63
CDC42-202ENST00000344548 TRAV3A0A0B4J244 114 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 LINC00862A6NCI5 91 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 MARCH11A6NNE9 402 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 GPR137BO60478 399 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 CT45A6P0DMU7 189 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 CT45A5P0DMU8 189 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 CT45A7P0DMV0 189 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 RAB7AP51149 207 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 SPINK9Q5DT21 86 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 LYRM2Q9NU23 88 aaPredicted RBP11.09□□□□□ -0.63
CDC42-202ENST00000344548 GAB2Q9UQC2 676 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 UBR5O95071 2799 aaPredicted RBP11.09□□□□□ -0.63
CDC42-202ENST00000344548 C22orf46C9J442 243 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 REG1BP48304 166 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 R3HDM4Q96D70 268 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 FAM208BQ5VWN6 2430 aa11.09□□□□□ -0.63
CDC42-202ENST00000344548 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
CDC42-202ENST00000344548 WDR25Q64LD2 544 aaPredicted RBP11.08□□□□□ -0.64
CDC42-202ENST00000344548 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
CDC42-202ENST00000344548 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
CDC42-202ENST00000344548 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
CDC42-202ENST00000344548 RAB9BQ9NP90 201 aa11.08□□□□□ -0.64
CDC42-202ENST00000344548 ZFP57Q9NU63 452 aa11.08□□□□□ -0.64
CDC42-202ENST00000344548 SYNGR2O43760 224 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 FSTL3O95633 263 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 IGKV1-16P04430 117 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 IGHV1-8P0DP01 117 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 TPT1P13693 172 aaKnown RBP11.07□□□□□ -0.64
CDC42-202ENST00000344548 OR2B8PP59922 312 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 CLINT1Q14677 625 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 GPR157Q5UAW9 335 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 S1PR3Q99500 378 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 TET2Q6N021 2002 aaPredicted RBP11.07□□□□□ -0.64
CDC42-202ENST00000344548 CSMD1Q96PZ7 3565 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 FBXO24O75426 580 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 CRYZL1O95825 349 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 HPRT1P00492 218 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 RAB14P61106 215 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 ARL16Q0P5N6 197 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 TMEM267Q0VDI3 215 aaPredicted RBP11.07□□□□□ -0.64
CDC42-202ENST00000344548 AUP1Q9Y679 476 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 TNCP24821 2201 aa11.07□□□□□ -0.64
CDC42-202ENST00000344548 SRRM4A7MD48 611 aaKnown RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 J3QR06 171 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 TOR1AO14656 332 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 FAM157CP0CG43 387 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 VAMP2P63027 116 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 TNFRSF9Q07011 255 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms