RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 SRSF4Q08170 494 aaKnown RBP13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 FAM71F2Q6NXP2 309 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 SPAG16Q8N0X2 631 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 SLC35G3Q8N808 338 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 OR4P4Q8NGL7 312 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 DDB2Q92466 427 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 RBPMSQ93062 196 aaKnown RBP13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 WDR89Q96FK6 387 aaPredicted RBP13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 ADTRPQ96IZ2 230 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 REG4Q9BYZ8 158 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 CHIAQ9BZP6 476 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 CCDC168Q8NDH2 2452 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 CR1P17927 2039 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 PRRC2AP48634 2157 aaKnown RBP13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 DUXBA0A1W2PPF3 345 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 FAM25EA8MYX2 175 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 B4DSR2 109 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 RNF223E7ERA6 249 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 RAMP3O60896 148 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 TOX4O94842 621 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 IGKV1-39P01597 117 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 IGKV1D-39P04432 117 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 MSMBP08118 114 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 CT45A6P0DMU7 189 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 CT45A5P0DMU8 189 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 CT45A7P0DMV0 189 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 RPA2P15927 270 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 IL3RAP26951 378 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 LPAR6P43657 344 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 KLRD1Q13241 179 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 OR2B11Q5JQS5 317 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 GGNBP1Q5YKI7 109 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 GSG1LQ6UXU4 331 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF383Q8NA42 475 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 ASB13Q8WXK3 278 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 Q96MF0 132 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 TBX15Q96SF7 602 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 PCGF1Q9BSM1 259 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 C13orf42A0A1B0GVH6 325 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 C5orf51A6NDU8 294 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 MPTX1A8MV57 137 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 ODF3BA8MYP8 253 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 RNASEK-C17orf49H0YIS7 233 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 BUB1B-PAK6H3BSN5 160 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 IFNA21P01568 189 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 HOXB4P17483 251 aaPredicted RBP13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 RAP2BP61225 183 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 DIAPH2-AS1Q14236 149 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 CD300LFQ8TDQ1 290 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 SEC22AQ96IW7 307 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 OR10C1Q96KK4 312 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 PRELID3BQ9Y3B1 194 aa13.27□□□□□ -0.29
CEACAM1-202ENST00000344391 PIGBOS1A0A0B4J2F0 54 aa13.26□□□□□ -0.29
CEACAM1-202ENST00000344391 RBFOX2O43251 390 aaKnown RBP eCLIP13.26□□□□□ -0.29
CEACAM1-202ENST00000344391 FCGR3BO75015 233 aa13.26□□□□□ -0.29
CEACAM1-202ENST00000344391 MRPL20Q9BYC9 149 aaKnown RBP13.26□□□□□ -0.29
CEACAM1-202ENST00000344391 AMMECR1Q9Y4X0 333 aaPredicted RBP13.26□□□□□ -0.29
CEACAM1-202ENST00000344391 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 ITPR3Q14573 2671 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 BOLA2-SMG1P6H3BVE0 249 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 ARG1P05089 322 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 HNRNPCP07910 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 VDAC1P21796 283 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 KIR2DS2P43631 304 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 REG1BP48304 166 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 ZNF816Q0VGE8 651 aaPredicted RBP13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 TGIF2LXQ8IUE1 241 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 LINC01356Q8N9X3 169 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 PDCD10Q9BUL8 212 aa13.25□□□□□ -0.29
CEACAM1-202ENST00000344391 TRAV20A0A0B4J274 112 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 SMLR1H3BR10 107 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 S1PR2O95136 353 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 LDLRAD2Q5SZI1 272 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 OR2T35Q8NGX2 323 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 C2orf50Q96LR7 162 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 FOXC2Q99958 501 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 NABP2Q9BQ15 211 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 NMES1Q9C002 83 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 ZANQ9Y493 2812 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 G3V3Q6 166 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 HPRT1P00492 218 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 HTR1DP28221 377 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 UBE2E1P51965 193 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 CYCSP99999 105 aaKnown RBP13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 IL15RAQ13261 267 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 IAH1Q2TAA2 248 aaPredicted RBP13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 PDZD9Q8IXQ8 264 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 MAPK1IP1LQ8NDC0 245 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 OR5AN1Q8NGI8 311 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 LHX4Q969G2 390 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 LSM10Q969L4 123 aaKnown RBP13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 PLEKHA2Q9HB19 425 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 DPM3Q9P2X0 92 aa13.24□□□□□ -0.29
CEACAM1-202ENST00000344391 A0A0G2JRQ6 117 aa13.23□□□□□ -0.29
CEACAM1-202ENST00000344391 LEUTXA8MZ59 168 aa13.23□□□□□ -0.29
CEACAM1-202ENST00000344391 C1QBP02746 253 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms