RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NDPQ00604 133 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 PSG5Q15238 335 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 CROCCP3Q8IVE0 287 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
ERCC1-203ENST00000340192 SLC35D1Q9NTN3 355 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 METTL1Q9UBP6 276 aaKnown RBP11.43□□□□□ -0.58
ERCC1-203ENST00000340192 SPATA2Q9UM82 520 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 FBXO7Q9Y3I1 522 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 NOTCH3Q9UM47 2321 aa11.43□□□□□ -0.58
ERCC1-203ENST00000340192 DNAH3Q8TD57 4116 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 A0A0A6YYH2 397 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 A6NJ64 397 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 CDX1P47902 265 aaPredicted RBP11.42□□□□□ -0.58
ERCC1-203ENST00000340192 CX3CL1P78423 397 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 ZNF660Q6AZW8 331 aaPredicted RBP11.42□□□□□ -0.58
ERCC1-203ENST00000340192 FLYWCH2Q96CP2 140 aaKnown RBP11.42□□□□□ -0.58
ERCC1-203ENST00000340192 RCC1LQ96I51 464 aaKnown RBP11.42□□□□□ -0.58
ERCC1-203ENST00000340192 RAX2Q96IS3 184 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 DUX3Q96PT4 197 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 CLCC1Q96S66 551 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
ERCC1-203ENST00000340192 DIABLOQ9NR28 239 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 ANXA10Q9UJ72 324 aa11.42□□□□□ -0.58
ERCC1-203ENST00000340192 J3QRK9 145 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 SPDEFO95238 335 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 IGLV1-40P01703 118 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 NFYAP23511 347 aaPredicted RBP11.41□□□□□ -0.58
ERCC1-203ENST00000340192 MYCNOSP40205 109 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 ECSCRQ19T08 205 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 DEFB136Q30KP8 78 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 CNIH2Q6PI25 160 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 TMEM65Q6PI78 240 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 MINDY2Q8NBR6 621 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 P2RX4Q99571 388 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 FUNDC2Q9BWH2 189 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 TPSG1Q9NRR2 321 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 OR2W1Q9Y3N9 320 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 A3GALT2U3KPV4 340 aa11.41□□□□□ -0.58
ERCC1-203ENST00000340192 CCL24O00175 119 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 SLC25A17O43808 307 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 CA2P00918 260 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 EGR2P11161 476 aaPredicted RBP11.4□□□□□ -0.58
ERCC1-203ENST00000340192 DUTP33316 252 aaKnown RBP11.4□□□□□ -0.58
ERCC1-203ENST00000340192 LUMP51884 338 aaPredicted RBP11.4□□□□□ -0.58
ERCC1-203ENST00000340192 CRIP2P52943 208 aaPredicted RBP11.4□□□□□ -0.58
ERCC1-203ENST00000340192 TAGLNQ01995 201 aaKnown RBP11.4□□□□□ -0.58
ERCC1-203ENST00000340192 RTL8BQ17RB0 113 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 C19orf54Q5BKX5 351 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 UBE2NLQ5JXB2 153 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 FOXB2Q5VYV0 432 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 ZNF645Q8N7E2 425 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 GVQW1Q8N7I0 195 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 BVESQ8NE79 360 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 BEST4Q8NFU0 473 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 C4orf3Q8WVX3 66 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 SLC25A46Q96AG3 418 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 AUNIPQ9H7T9 357 aa11.4□□□□□ -0.58
ERCC1-203ENST00000340192 IGKV1D-13A0A0B4J2D9 117 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 A0A1W2PN81 502 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 LINC00473A8K010 186 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 XRCC3O43542 346 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 DUS4LO95620 317 aaKnown RBP11.39□□□□□ -0.59
ERCC1-203ENST00000340192 HLA-DQB1P01920 261 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 IGKV1-13P0DP09 117 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 PTHLHP12272 177 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 CHRNA7P36544 502 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 LGALS7P47929 136 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 ARPC4P59998 168 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 VBP1P61758 197 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 NCS1P62166 190 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 CBX3Q13185 183 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 KIAA0141Q14154 515 aaPredicted RBP11.39□□□□□ -0.59
ERCC1-203ENST00000340192 PPP1R27Q86WC6 154 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 HOGA1Q86XE5 327 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 SAMD12Q8N8I0 201 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 OR13F1Q8NGS4 319 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 DDB2Q92466 427 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 S100A16Q96FQ6 103 aaKnown RBP11.39□□□□□ -0.59
ERCC1-203ENST00000340192 ADTRPQ96IZ2 230 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 HARBI1Q96MB7 349 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 FAM103A1Q9BTL3 118 aaKnown RBP11.39□□□□□ -0.59
ERCC1-203ENST00000340192 NECAP2Q9NVZ3 263 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 NUBP2Q9Y5Y2 271 aa11.39□□□□□ -0.59
ERCC1-203ENST00000340192 SHOXO15266 292 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 SOX15O60248 233 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 SMIM18P0DKX4 95 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 RRASP10301 218 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 RAB9AP51151 201 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 RAB25P57735 213 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 TMEM267Q0VDI3 215 aaPredicted RBP11.38□□□□□ -0.59
ERCC1-203ENST00000340192 PJVKQ0ZLH3 352 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 TMEM177Q53S58 311 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms