RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NDUFA3O95167 84 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 PPYP01298 95 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 CD28P10747 220 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 HLA-DMAP28067 261 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 DUTP33316 252 aaKnown RBP12.05□□□□□ -0.48
UBE3B-201ENST00000340074 TAS2R46P59540 309 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 OR5AU1Q8NGC0 362 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 OR5H2Q8NGV7 314 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 ABHD1Q96SE0 405 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 SLC35D1Q9NTN3 355 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 KIAA1456Q9P272 454 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 LINC00527Q9UJ94 153 aa12.05□□□□□ -0.48
UBE3B-201ENST00000340074 LINC00473A8K010 186 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 SLC22A5O76082 557 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 HRH1P35367 487 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 DYRK1AQ13627 763 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 C10orf99Q6UWK7 81 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 FOXRED2Q8IWF2 684 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 SECTM1Q8WVN6 248 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 GIMAP1Q8WWP7 306 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 DDB2Q92466 427 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 FLYWCH2Q96CP2 140 aaKnown RBP12.04□□□□□ -0.48
UBE3B-201ENST00000340074 RNF5Q99942 180 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 DCUN1D5Q9BTE7 237 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 NXF2Q9GZY0 626 aaKnown RBP12.04□□□□□ -0.48
UBE3B-201ENST00000340074 ZNF107Q9UII5 783 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-201ENST00000340074 RBMX2Q9Y388 322 aaKnown RBP12.04□□□□□ -0.48
UBE3B-201ENST00000340074 WNK1Q9H4A3 2382 aa12.04□□□□□ -0.48
UBE3B-201ENST00000340074 ZNF701M0R085 212 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 RRHO14718 337 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 KCNAB3O43448 404 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 TPPPO94811 219 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 RCVRNP35243 200 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 FXYD4P59646 89 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 RPS16P62249 146 aaKnown RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 ZNF660Q6AZW8 331 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 LIN54Q6MZP7 749 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 DHRS11Q6UWP2 260 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 BVESQ8NE79 360 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 OR52I2Q8NH67 350 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 MCFD2Q8NI22 146 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 DIRAS2Q96HU8 199 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 ADTRPQ96IZ2 230 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 FBXL15Q9H469 300 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 CCL28Q9NRJ3 127 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 KLK11Q9UBX7 282 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 AP4M1O00189 453 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 HERV-K104P61576 105 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 EIF4EBP1Q13541 118 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 PLGLAQ15195 96 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 RTL8BQ17RB0 113 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 STPG2Q8N412 459 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 CHPT1Q8WUD6 406 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 C15orf40Q8WUR7 153 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 GPHA2Q96T91 129 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 TSNAXQ99598 290 aaKnown RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 ZNF2Q9BSG1 426 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 SLC5A7Q9GZV3 580 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 TAS2R8Q9NYW2 309 aa12.03□□□□□ -0.48
UBE3B-201ENST00000340074 METTL1Q9UBP6 276 aaKnown RBP12.03□□□□□ -0.48
UBE3B-201ENST00000340074 PSMB11A5LHX3 300 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 M0QZ24 198 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 RRASP10301 218 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 RPL30P62888 115 aaKnown RBP12.02□□□□□ -0.49
UBE3B-201ENST00000340074 CBX3Q13185 183 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 IL18Q14116 193 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 PSG5Q15238 335 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 PRR31Q5SQ13 230 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 TMEM17Q86X19 198 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 FCAMRQ8WWV6 532 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 HARBI1Q96MB7 349 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 HSD17B10Q99714 261 aaKnown RBP12.02□□□□□ -0.49
UBE3B-201ENST00000340074 MTFP1Q9UDX5 166 aa12.02□□□□□ -0.49
UBE3B-201ENST00000340074 IGHV7-81A0A0B4J1V7 117 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 GABARAPH6UMI1 98 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 FCN1O00602 326 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 SHOXO15266 292 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 TNFSF12O43508 249 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 SLC25A17O43808 307 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 FCGR3BO75015 233 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 SPDEFO95238 335 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 CRYZL1O95825 349 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 IGLV2-23P01705 113 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 TNFSF8P32971 234 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 DGCR2P98153 550 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 CD83Q01151 205 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 C2orf68Q2NKX9 166 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 NSUN5P1Q3KNT7 163 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
UBE3B-201ENST00000340074 OR2B11Q5JQS5 317 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms