RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CELSR1Q9NYQ6 3014 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 LY6LH3BQJ8 138 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 GOSR2O14653 212 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 TOR1AO14656 332 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 RAMP3O60896 148 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 CT45A6P0DMU7 189 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 CT45A5P0DMU8 189 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 CT45A7P0DMV0 189 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 SRPXP78539 464 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 CATR1Q13166 79 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 KLRD1Q13241 179 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 DIAPH2-AS1Q14236 149 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 LDLRAD2Q5SZI1 272 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 NCR3LG1Q68D85 454 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 TCTEX1D1Q8N7M0 179 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 LINC01356Q8N9X3 169 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 ZNF383Q8NA42 475 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 WFDC11Q8NEX6 87 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 OR5M8Q8NGP6 311 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 S1PR3Q99500 378 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 ADAP1O75689 374 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 CCNKO75909 580 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 OR2A4O95047 310 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 IGKV1-39P01597 117 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 IGKV1D-39P04432 117 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 THBS3P49746 956 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 CD83Q01151 205 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 DCAF12L2Q5VW00 463 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 SELENOHQ8IZQ5 122 aaKnown RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 LGI3Q8N145 548 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 TCTEX1D2Q8WW35 142 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 IL22RA2Q969J5 263 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 OR2A7Q96R45 310 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 PCGF1Q9BSM1 259 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 ZNF436Q9C0F3 470 aaPredicted RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 RANGRFQ9HD47 186 aaPredicted RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 CCDC168Q8NDH2 2452 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 MPTX1A8MV57 137 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 A8MV72 311 aaPredicted RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 ZNF16P17020 682 aaPredicted RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 SRSF4Q08170 494 aaKnown RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 TMEM268Q5VZI3 342 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 LYZL2Q7Z4W2 148 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 SPAG16Q8N0X2 631 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 SLC35G3Q8N808 338 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 MAPK1IP1LQ8NDC0 245 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 RBPMSQ93062 196 aaKnown RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 FYTTD1Q96QD9 318 aaKnown RBP6.35□□□□□ -1.39
TMC1-202ENST00000340019 ZANQ9Y493 2812 aa6.35□□□□□ -1.39
TMC1-202ENST00000340019 CCSO14618 274 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 RBFOX2O43251 390 aaKnown RBP eCLIP6.34□□□□□ -1.39
TMC1-202ENST00000340019 SIX6O95475 246 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 ARG1P05089 322 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 RPA2P15927 270 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 GATA3P23771 443 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 IL3RAP26951 378 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 TMEM249Q2WGJ8 235 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 ZNF695Q8IW36 515 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 OR5AN1Q8NGI8 311 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 CD300LFQ8TDQ1 290 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 WDR89Q96FK6 387 aaPredicted RBP6.34□□□□□ -1.39
TMC1-202ENST00000340019 ADTRPQ96IZ2 230 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 HIF1ANQ9NWT6 349 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 AMMECR1Q9Y4X0 333 aaPredicted RBP6.34□□□□□ -1.39
TMC1-202ENST00000340019 DUXBA0A1W2PPF3 345 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 SERPINE2P07093 398 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 HOXB5P09067 269 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 IGHV4-31P0DP07 118 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 UBE2E1P51965 193 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 OR2B11Q5JQS5 317 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 TCTE3Q8IZS6 198 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 SLC7A5P1Q8MH63 180 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 NABP2Q9BQ15 211 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 MRPL20Q9BYC9 149 aaKnown RBP6.34□□□□□ -1.39
TMC1-202ENST00000340019 TMED3Q9Y3Q3 217 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 CREBBPQ92793 2442 aa6.34□□□□□ -1.39
TMC1-202ENST00000340019 FCGR3BO75015 233 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 HNRNPCP07910 306 aaKnown RBP eCLIP6.34□□□□□ -1.4
TMC1-202ENST00000340019 GIPP09681 153 aaPredicted RBP6.34□□□□□ -1.4
TMC1-202ENST00000340019 HTR1DP28221 377 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 KIR2DS2P43631 304 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 LPAR6P43657 344 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 REG1BP48304 166 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 ZNF816Q0VGE8 651 aaPredicted RBP6.34□□□□□ -1.4
TMC1-202ENST00000340019 NMSQ5H8A3 153 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 GGNBP1Q5YKI7 109 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 TGIF2LXQ8IUE1 241 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 ASB13Q8WXK3 278 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 OR10C1Q96KK4 312 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 PRELID1Q9Y255 219 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 PRELID3BQ9Y3B1 194 aa6.34□□□□□ -1.4
TMC1-202ENST00000340019 PIGBOS1A0A0B4J2F0 54 aa6.33□□□□□ -1.4
TMC1-202ENST00000340019 CENPVL3A0A0U1RRI6 287 aa6.33□□□□□ -1.4
TMC1-202ENST00000340019 LEUTXA8MZ59 168 aa6.33□□□□□ -1.4
TMC1-202ENST00000340019 G3V3Q6 166 aa6.33□□□□□ -1.4
TMC1-202ENST00000340019 H0YJW9 148 aa6.33□□□□□ -1.4
TMC1-202ENST00000340019 S1PR2O95136 353 aa6.33□□□□□ -1.4
TMC1-202ENST00000340019 VDAC1P21796 283 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms