RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 GAPDHP04406 335 aaKnown RBP11.97□□□□□ -0.49
CSRP1-201ENST00000340006 SAA4P35542 130 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 PIGPP57054 158 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 MIDNQ504T8 468 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 KLF17Q5JT82 389 aaPredicted RBP11.97□□□□□ -0.49
CSRP1-201ENST00000340006 FAM120AOSQ5T036 256 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 TEX29Q8N6K0 151 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 ZNF486Q96H40 463 aaPredicted RBP11.97□□□□□ -0.49
CSRP1-201ENST00000340006 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 NUP50Q9UKX7 468 aa11.97□□□□□ -0.49
CSRP1-201ENST00000340006 HIVEP1P15822 2718 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 SRP14P37108 136 aaKnown RBP11.96□□□□□ -0.49
CSRP1-201ENST00000340006 SUPT4H1P63272 117 aaKnown RBP11.96□□□□□ -0.49
CSRP1-201ENST00000340006 DIAPH2-AS1Q14236 149 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 Q71RC1 249 aaPredicted RBP11.96□□□□□ -0.49
CSRP1-201ENST00000340006 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 OR11H7Q8NGC8 314 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 CASTOR1Q8WTX7 329 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 MALSU1Q96EH3 234 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.49
CSRP1-201ENST00000340006 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
CSRP1-201ENST00000340006 ZFHX3Q15911 3703 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 TEX13DA0A0J9YY54 714 aaPredicted RBP11.96□□□□□ -0.5
CSRP1-201ENST00000340006 IGLV2-14P01704 120 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 HNF1AP20823 631 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 PAX6P26367 422 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 CD83Q01151 205 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 MOB3BQ86TA1 216 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.96□□□□□ -0.5
CSRP1-201ENST00000340006 BVESQ8NE79 360 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 RTN4IP1Q8WWV3 396 aaPredicted RBP11.96□□□□□ -0.5
CSRP1-201ENST00000340006 C22orf15Q8WYQ4 148 aa11.96□□□□□ -0.5
CSRP1-201ENST00000340006 CRYM-AS1A6NIL9 109 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 PROP1O75360 226 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 PGLYRP1O75594 196 aaPredicted RBP11.95□□□□□ -0.5
CSRP1-201ENST00000340006 SFT2D2O95562 160 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 DUS4LO95620 317 aaKnown RBP11.95□□□□□ -0.5
CSRP1-201ENST00000340006 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 CXCL3P19876 107 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 LINC00205P59089 165 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 BPIFB3P59826 476 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 SLC9A3R2Q15599 337 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 TPTE2P1Q5T6R2 138 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 SGPP2Q8IWX5 399 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 C12orf45Q8N5I9 185 aaPredicted RBP11.95□□□□□ -0.5
CSRP1-201ENST00000340006 CCDC71LQ8N9Z2 235 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 MITD1Q8WV92 249 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 ST6GAL2Q96JF0 529 aa11.95□□□□□ -0.5
CSRP1-201ENST00000340006 LY6LH3BQJ8 138 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 MPPED1O15442 326 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 ZNF833PQ6ZTB9 187 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 OR51H1Q8NH63 302 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 PHB2Q99623 299 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
CSRP1-201ENST00000340006 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
CSRP1-201ENST00000340006 RANGRFQ9HD47 186 aaPredicted RBP11.94□□□□□ -0.5
CSRP1-201ENST00000340006 LIN54Q6MZP7 749 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 TCTEX1D2Q8WW35 142 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 ZNF251Q9BRH9 671 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 MGAT4CQ9UBM8 478 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 KCNIP3Q9Y2W7 256 aa11.94□□□□□ -0.5
CSRP1-201ENST00000340006 SOX21Q9Y651 276 aaPredicted RBP11.94□□□□□ -0.5
CSRP1-201ENST00000340006 MXRA5Q9NR99 2828 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 A0A0U1RQK1 487 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 RNF212BA8MTL3 300 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 IFNA2P01563 188 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 CT45A6P0DMU7 189 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 CT45A5P0DMU8 189 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 CT45A7P0DMV0 189 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 ARHGDIBP52566 201 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 ZNF137PP52743 207 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 C11orf88Q6PI97 169 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
CSRP1-201ENST00000340006 NAA60Q9H7X0 242 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 PRELID3BQ9Y3B1 194 aa11.93□□□□□ -0.5
CSRP1-201ENST00000340006 IGHV1-3A0A0C4DH29 117 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 H7C2Y5 167 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
CSRP1-201ENST00000340006 RND3P61587 244 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 CATR1Q13166 79 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 C2orf68Q2NKX9 166 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 TUSC1Q2TAM9 212 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 FAM71F2Q6NXP2 309 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 KCTD9Q7L273 389 aa11.92□□□□□ -0.5
CSRP1-201ENST00000340006 BCL6BQ8N143 479 aaPredicted RBP11.92□□□□□ -0.5
CSRP1-201ENST00000340006 DYNAPQ8N1N2 210 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms